Alteromonas macleodii ATCC 27126: MASE_15215
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Entry
MASE_15215 CDS
T02246
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
amac
Alteromonas macleodii ATCC 27126
Pathway
amac03420
Nucleotide excision repair
amac03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MASE_15215
03430 Mismatch repair
MASE_15215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_15215
Enzymes [BR:
amac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MASE_15215
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MASE_15215
MMR (mismatch excision repair)
Other MMR factors
MASE_15215
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
Viral_helicase1
ResIII
HHH
A9CJY8-like_N
AAA_30
RecR_HhH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AFS38543
LinkDB
All DBs
Position
3536909..3539014
Genome browser
AA seq
701 aa
AA seq
DB search
MLSHSELNPQQQEAVNYGLSSVGAGETELSDETHHPLLIIAGAGTGKTNTLAHKTAQLIL
HGVAPERILLMTFARRASSELSSRANRIIERTLREKQKAYHPVTLPWMGTFHSIASRLLR
EHASLIGLDPDFTVMDRNDSADMLDLLRHELGFSGVNRRFPKKKTCLDIYSRCVNAQAPL
IDILDTHFPYCSEWEEELNTLFAHYAKTKIEQVSLDYDDLLLYCFHMAQVDAIAQKVREQ
FDNVLVDEYQDTNVLQAGILKGFFPTGEGLTVVGDDAQSIYSFRSATVDNILNFPTAFSL
PGKVITLQQNYRSHPNILNLSNTLLSESDEGYKVSLFSERKSGPMPKWITVENDMFQAEY
IVERVLAAREEGIDLKQQAVLFRSSYHSDRLELELTRRNIPFVKHGGLKFLEASHVKDML
CILRWADNPKHKISAFRVLKLLPGIGPKIAERVFNDLEKHDFALGKLRSFALSESAKPSF
LSLVDLLDNVHHNNIPWTEQTSAIAAFYKDLLEANYDDHFTRFGDIEQLTMISGQYSSRE
RFLTELTLDPPQSTGDLAGKPLLDDDFLILSTVHSAKGQEWKHVFVLNVADGNFPNEYAA
GDKRALEEERRLLYVAITRAKDELSLVQPLKYWVPEQQKFGDKHVYGAKSRFFTDAVCAC
MEPIAYPKRTASASEKKIAKGAIADIKKNILGMWNNTSPHR
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgctctctcattctgaattaaacccgcagcagcaagaagccgtgaattacgggttgagt
tccgtaggagcgggcgaaacggagctgagcgatgaaacgcaccacccgctgttaattatt
gcaggcgctggcacaggtaaaactaacactctcgctcacaaaacagcacagctaatattg
catggtgttgcgccagagcgaattttactgatgacgtttgcgcgaagggcttcgtcagaa
ttaagttcacgggcgaaccgcataatagagcgaacgttacgtgagaaacaaaaggcgtat
catccggtcacacttccttggatgggcacttttcattcaatcgcatcgcgactgctacga
gagcacgcttcactcattggtttagatcccgactttacggttatggatcgtaacgacagc
gcggatatgcttgatttgcttcgccacgaacttggcttcagcggtgtcaatcggcgcttt
cctaaaaagaaaacgtgtttagacatttactctcgttgcgtgaacgcgcaagcaccgctt
atcgacatactcgatactcatttcccctattgtagcgagtgggaagaagagctgaacacg
ctgtttgctcactatgcgaaaactaaaattgaacaagtgagtttagactatgacgactta
ctgctttactgttttcacatggcgcaggtcgacgctattgctcaaaaagtaagagaacaa
ttcgacaatgtgttggtagacgaatatcaggataccaacgtacttcaagctggcatttta
aaaggtttcttcccaaccggtgaaggtcttaccgttgtaggcgatgacgcccaatcaatc
tactcatttcgctcagcaacggtagacaatatccttaactttccaactgcattttccttg
cctggcaaagtgataacgctacaacagaattatcggtcacatccgaacatattgaacttg
tctaatacccttctttcagaaagtgatgaaggctataaggtatcgttgttcagcgagcgt
aaaagcggccctatgcctaagtggataaccgttgaaaacgacatgttccaagcagaatat
atcgttgagcgagttttggcggctcgtgaagaagggattgatttaaaacagcaagccgtt
ctgtttcgttcaagttatcacagcgatcgtctagagcttgaacttactcgacgcaatatt
cctttcgtaaaacacggtggccttaaattcctagaggcttctcacgtaaaagacatgctt
tgcattttacgttgggcagacaaccccaaacacaaaatatctgcttttagagtgcttaag
ttgttacctggtataggtccaaagatagctgagagagtgtttaacgatttagaaaagcac
gactttgcattgggtaaattgcgcagcttcgcactttcagagtccgcgaagccttcattt
ctttctcttgttgatttgctagataacgtgcaccacaacaatattccatggaccgagcaa
acaagcgccattgcagcgttttacaaagatttgttggaagctaattatgacgatcatttc
acacgtttcggcgatattgaacagctcacaatgatctctgggcagtattcatcgagagag
cgatttttaactgaactcacactagatccaccgcagagcacaggtgatctggcgggcaaa
cctttgcttgatgacgactttcttatcttgtcgacggtgcatagcgctaaaggtcaagaa
tggaagcatgtatttgtgctaaatgtggctgacggcaattttcctaatgagtacgcagcg
ggcgataaacgcgccctcgaagaagaacgacgtttgctttacgtagccataacacgagcg
aaagatgagcttagcttagttcagcccctgaaatattgggtgccagagcaacaaaagttt
ggtgacaagcatgtatacggtgccaagagccgtttttttaccgatgctgtttgcgcttgc
atggaacccattgcttaccctaagcgcactgcttcagccagtgaaaagaagatagccaaa
ggcgctatagccgatataaagaaaaatattcttgggatgtggaataataccagtccgcat
agataa
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