Alteromonas macleodii ATCC 27126: MASE_16315
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Entry
MASE_16315 CDS
T02246
Name
(GenBank) putative DNA polymerase
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amac
Alteromonas macleodii ATCC 27126
Pathway
amac03030
DNA replication
amac03430
Mismatch repair
amac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MASE_16315
03430 Mismatch repair
MASE_16315
03440 Homologous recombination
MASE_16315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amac03032
]
MASE_16315
03400 DNA repair and recombination proteins [BR:
amac03400
]
MASE_16315
Enzymes [BR:
amac01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MASE_16315
DNA replication proteins [BR:
amac03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MASE_16315
DNA repair and recombination proteins [BR:
amac03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MASE_16315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFS38759
LinkDB
All DBs
Position
complement(3811040..3811729)
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AA seq
229 aa
AA seq
DB search
MITRIIEACASVLFGKRQFRKSLRDKTLGDTPLASVDLELTSLDPVTTQITSIGYVSGSA
GKITLSSSGYHVINTSADLGQSPVIHGLTLDILQQGEGLADAINSLLPLLKTHVLIFHNA
RLDLMALDSAFKRCGLPQMEVLYLDTLQLALYQLNKQHQVLPSNSATLTVCRQRLDLPAF
PEHNALDDALATMQLFYAQLNELGITLENSLESLAHTNAVGRFKLGVAH
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
atgataacgcgaataatcgaagcctgtgcatcggtactgtttgggaagcgtcaattcaga
aagtcattacgtgataaaacgttgggcgacactcctttggcgtctgttgatttagagctc
acatcgttagaccctgtgacaactcaaattacatcgattggctatgtaagtggttcagct
ggaaaaattacgctttcctccagtggctatcacgttattaatacgtcagcggacttagga
caaagccctgtaatacacggattgaccttagatattttgcaacaaggcgaaggcttagca
gacgccatcaattcattgctaccactactgaagacacatgttctaatttttcacaatgcg
cgattagatttgatggcgcttgatagtgccttcaaacggtgtggattaccgcagatggaa
gtgctctatcttgatacgcttcagctcgcactttatcagttaaacaaacaacatcaggtg
ctaccgagtaatagtgcaacgctaacggtttgtaggcaacggttagacttacccgcgttt
cctgaacacaacgcactagatgatgcgttagcgacaatgcagttgttttacgcccagcta
aatgaattgggaattactttggagaattcactcgagtctttggctcacacgaatgctgtt
ggccgttttaagctgggagtagcgcattag
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