Alteromonas macleodii ATCC 27126: MASE_17600
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Entry
MASE_17600 CDS
T02246
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
amac
Alteromonas macleodii ATCC 27126
Brite
KEGG Orthology (KO) [BR:
amac00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amac03009
]
MASE_17600
Enzymes [BR:
amac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MASE_17600
Ribosome biogenesis [BR:
amac03009
]
Prokaryotic type
rRNA helicases
MASE_17600
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
AAA_22
Terminase_6N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AFS39010
LinkDB
All DBs
Position
complement(4126206..4127585)
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AA seq
459 aa
AA seq
DB search
MTVETVKHLDINPAITKALDSQGIYQLSPIQAQSLPEALQGKDVIGQAQTGSGKTLCFVI
PALQHVEVNDFTTQAIILCPTRELADQVAQQCRSAAKNIGNIKVTTLCGGQPMGPQIQSL
KHSPHIIVGTPGRVMDHVEKRRIDLSNVKLRVLDEADRMLDMGFEDDLRIIFGQTPKQVQ
TLLFSATFTEQIERVAKQYLHNPVTCKVESQDSKPAITQLGYNVLPHTRTQALKAVLTHY
QPKNAIVFCNRKVQVNEVVEELIEDGFSAAGLQGDLEQHQRTSVLMQFASDALQVLVATD
VAARGLDIDDVACVINYTVSEEPETHIHRIGRTARAGAQGMAVTLVSDDEEHFLRKIEVL
QESDIPLKGAQSLRFHKNKITQPEFTCISLSAGKKEKLRPGDLVGALTKDAGIPGDDLGK
IKVQNSMSFVAVKTRSVKKAMAHFREGKIKGKRIRARKL
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgacagttgaaacagttaagcatttagatataaaccctgccatcaccaaggcgctagac
tcacaaggcatttaccaactttcccctatacaggcacaatcgctccctgaggcgttgcag
gggaaagatgtgataggccaagcgcagacgggcagcggcaagactctgtgctttgtaatt
cctgccttgcagcacgtagaagtgaatgattttaccacgcaggctatcatactttgtcct
acccgagagcttgctgatcaagtggctcagcagtgccgttcggcggctaagaacatcggt
aatattaaagtgaccacgttatgtggtggccagcctatggggccgcagattcagtcactg
aaacatagccctcacatcattgtgggcacgccgggtcgcgtaatggaccatgtggaaaag
cgtcgaattgacctaagtaacgtaaagttgcgtgtcctcgatgaagccgatcgcatgtta
gatatgggctttgaagacgatttacgcattattttcggtcaaacgccaaaacaagtgcaa
accctattgttttctgcaacctttacggaacaaattgagcgtgtagccaagcagtacctg
cacaacccggtaacctgtaaagttgagtctcaagacagtaaacccgctatcacccaattg
ggctacaacgtgctcccgcacacacgcactcaggcgcttaaagcggtacttacccactac
caacctaaaaatgccattgtattttgtaaccgcaaggttcaggtaaatgaagtggttgag
gagcttatcgaagatggctttagcgcagctggacttcagggggacttggaacagcatcaa
cgcacatcggtgctaatgcagttcgccagcgatgcgctacaagtacttgttgccaccgat
gtagctgcgcgagggctggatattgatgatgttgcctgcgtaattaattatacggtaagt
gaagagccggaaacccatattcaccgcattggtcgcacggcgcgagcaggcgcacagggc
atggcggtaacgctagtcagcgatgacgaagagcacttcttgcgaaaaatagaagtattg
caagaaagcgatattccacttaaaggcgcacaaagcctgcgttttcataaaaataaaatt
actcagcctgaatttacctgtatttcactaagcgcgggtaaaaaagaaaagcttcgccca
ggtgatctggtgggtgcacttaccaaagatgcgggcattcctggcgatgacttgggcaaa
attaaagtgcaaaacagcatgagttttgtcgcagtgaaaacgcgaagcgtgaaaaaagcc
atggcgcactttagagaaggtaagatcaaaggaaagcgtattagagcccgaaaactttaa
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