Alteromonas mediterranea UM4b: I636_00970
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Entry
I636_00970 CDS
T02723
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad00300
Lysine biosynthesis
amad00470
D-Amino acid metabolism
amad01100
Metabolic pathways
amad01110
Biosynthesis of secondary metabolites
amad01120
Microbial metabolism in diverse environments
amad01230
Biosynthesis of amino acids
Module
amad_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I636_00970 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I636_00970 (dapF)
Enzymes [BR:
amad01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I636_00970 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
YNQ4_N
Motif
Other DBs
NCBI-ProteinID:
AGQ00072
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All DBs
Position
complement(219139..219969)
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AA seq
276 aa
AA seq
DB search
MQVQFSKMHGLGNDFMVIDNVTQNVFFSKEKIQQLADRNFGIGFDQLLMVEPPYDPEQDF
HYRIFNADGSEVEQCGNGARCFARFVKQKGLINRNKIVVSTKAGKMVLYLEKDGQVTVNM
GKPEFEPANIPLKANKQENTYILRVGESTLFIGAASMGNPHCVMEVDDVDTANVAEIGPL
VEKHERFSEGVNVGFMQIINDSHIKLRVFERGSGETLACGSGACAAVAIGQIQGKLSKDV
RVDLPGGSLRIRWPGPDNVLKMTGPAEHVYDGHINL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcaattttccaaaatgcacggtttgggtaacgatttcatggtaattgataac
gttactcaaaacgtatttttctctaaagaaaaaatccaacaactggctgaccgaaatttc
ggtatcggcttcgaccagctgttgatggttgaaccgccttacgatcctgaacaagacttt
cattatcgtattttcaatgccgatggctctgaagtagagcagtgcggtaatggggcacgt
tgctttgcgcgctttgttaagcaaaagggcttgataaaccgcaacaaaattgtagtgagt
accaaagcaggcaaaatggtgctttacctagagaaagacgggcaagttaccgtcaatatg
ggtaagccagagttcgaaccggctaacattccccttaaagccaacaagcaagaaaatact
tatatcttacgcgtcggcgaaagcaccttattcattggcgcagcgtcaatgggcaaccct
cattgcgtaatggaagttgacgatgtcgataccgccaacgtcgctgaaattggcccgcta
gttgaaaagcatgaacgcttttcagaaggcgtgaacgtaggctttatgcaaatcatcaac
gactcgcatattaagctaagagtatttgagcgtggttcgggtgaaacccttgcttgtgga
agcggtgcgtgcgcagcagttgcaattggtcaaatacagggtaaattaagtaaagacgtg
cgggtagacttacccgggggcagtttacgtatacgctggcccggcccagataatgtatta
aaaatgacagggcctgccgaacacgtatatgacggacacataaatctatga
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