Alteromonas mediterranea UM4b: I636_02145
Help
Entry
I636_02145 CDS
T02723
Name
(GenBank) penicillin-binding protein 1B
KO
K05365
penicillin-binding protein 1B [EC:
2.4.99.28
3.4.16.4
]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad00550
Peptidoglycan biosynthesis
amad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I636_02145
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
amad01003
]
I636_02145
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amad01011
]
I636_02145
Enzymes [BR:
amad01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
I636_02145
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I636_02145
Glycosyltransferases [BR:
amad01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
I636_02145
Peptidoglycan biosynthesis and degradation proteins [BR:
amad01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
I636_02145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
UB2H
UvrB_inter
CrgA
Motif
Other DBs
NCBI-ProteinID:
AGQ00305
LinkDB
All DBs
Position
476166..478526
Genome browser
AA seq
786 aa
AA seq
DB search
MTKRQTKNNSSSKSNASKKTAAGKSTTKRSWFFKLFWRVCLIGLVVLGAYAFYLDAQIKH
AFSGNKWEVPAQIFARPLEVSKGEEITPQEVIDELNLLGYRKVAFADSSGEYSYQNKVLT
VQRRAFQFPEGAEPLRHLVLTWEGARIGEIYDKSQGRPYGSVKLEPWLVTRMTSGSHEDR
MLVTLDTIPEMLPKALTLVEDRNFYNHHGVAPLSILRALMANIAAGRTVQGGSTLTQQLV
KNMFLTRERSLVRKAKEAIMAVIIDARYSKSEIIEAYLNEVFLGQNGDMAVHGFGLASYF
YFDRPANELSTPEIATLVAIIKGPSYYNPRKYAERTKERRDLVLRMLFDENEINRQDYER
YVNMPLGLASGASLASGKHPAFMEQVRKELNEILAEPSLRDSGVKVFTTLDIVAQRRAEK
ALSGTLNGLQKDRSVPLQGAMVVTDSASGEVRAIVGGKDFAFKGFNRALDAKRPIGSLIK
PAVYLTALEDPTQFNLATPLKDEPITLESRNGTEWSPQNYDKEFRGQVPLLQGLVESLNV
PTVNLGMQIGLDALADTIERLGVTTPVDKVPSLTLGAFELTPFSTNQMYQTLSNDGRYIP
LHTVSSVVTADNALLWKKAEFFAQRTDEAATYLLNYALYKVTTEGTAKRIGWNFGNVNMA
GKTGTTDDYRDSWFSGFDRNNVVTVWVGNDDNQPVNLTGAGGALPVFVNYMKSQSPKSLS
RRFPKGLGIAHFDAKTGAVVVAGCAGSLSVPAILDVLPPAQQDCAGRPVDENGDKKEKSW
WERIFG
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
gtgacaaaaagacagactaaaaacaattcatcttcaaaaagcaatgcttcgaaaaaaact
gcagcgggaaaaagtacaaccaaacgttcgtggttttttaaactgttctggcgtgtatgc
cttatagggcttgtggtgctaggggcatatgccttttatctcgacgcacaaattaaacat
gcgttctcgggtaacaagtgggaagtacctgcgcaaattttcgcacgtcctttagaagtg
agtaaaggcgaggagataacgccacaagaagtcattgatgaactcaatttgctgggctat
cgcaaggtggcttttgctgacagtagcggtgaatatagctatcaaaacaaggtgttaact
gtgcagcgccgcgcgtttcaattccccgagggagcggagcctcttcgacacttagtatta
acgtgggaaggggcgcgtatcggtgaaatatacgataagtcacaaggccgtccctacggt
tctgtaaagttagagccatggctagtaacacgcatgacgagcggctctcatgaagaccgc
atgttagtgacgttagatactatccctgaaatgttacctaaagcgctgacgctggtggaa
gatcgcaatttttataaccaccatggtgttgcaccactttcaatattgcgggccctaatg
gcgaatattgctgctggtcgtacggttcaaggtggtagcacgctgacgcagcagctggtt
aaaaacatgtttttaacccgcgagcgctcccttgtacgcaaggctaaagaggccataatg
gcggtcattatagacgcccgctacagcaagtctgagattatcgaagcctatttaaatgag
gtgtttttagggcaaaacggcgacatggctgtacatggatttgggcttgctagctatttc
tactttgaccgtccggccaacgagctaagcacgcccgaaatagccacgctggttgctatt
atcaaaggcccatcttattacaatccacgaaagtatgcagagcgcacaaaagagcgtcga
gatttagtacttcgaatgttgttcgatgaaaatgaaataaaccgtcaagactacgagcgc
tatgtgaacatgccgttagggcttgccagcggtgcgagtttagcaagcggtaaacaccct
gctttcatggagcaggttcgcaaagaactcaatgaaattttagcagagccaagcctaaga
gactcgggcgttaaagtgtttaccacactggatatcgttgctcagcgtcgggcagaaaaa
gcattatcgggcaccctaaatggcctgcaaaaagatagaagcgttccattgcaaggtgcc
atggtagtcaccgacagtgcaagcggtgaagtacgcgctatcgtaggtggtaaagacttt
gcatttaaaggttttaatcgagcattagatgctaagaggccaataggctcattgattaaa
ccagctgtgtacttaactgccttagaagatcctacccagtttaacttggctacacccctt
aaagacgagccaattaccctagaaagtagaaacggcaccgaatggtcgccgcaaaactac
gataaagagttcagagggcaggtgcctctgcttcaggggttagtcgaatctttgaacgtg
ccaacagttaatttaggcatgcagataggcctagatgcgttagccgataccattgagcgg
ttaggggttaccacgccagtagataaagtaccgtcgttaaccttgggcgctttcgaacta
acgccatttagcacaaaccaaatgtatcaaaccctatcaaacgatggccgctacataccg
cttcacacggtgagctctgtggttacggcagataatgcattactttggaagaaggccgag
ttctttgctcagcgcacggatgaagccgccacttacttactgaactacgccctgtacaag
gtgaccacagaaggtacagcaaaacgcataggctggaactttggtaatgtaaatatggca
gggaaaacaggtacaaccgatgattatcgcgatagttggtttagcggtttcgacagaaat
aatgtggtgaccgtttgggtcggcaatgacgataatcaaccagtaaatttaaccggtgca
ggtggcgcgctgcctgtgtttgtaaattatatgaagtcacagtcaccgaagtctctatct
agacgtttccctaaagggttaggtattgcacatttcgatgcgaagacgggggcggtagtg
gtcgctgggtgcgcaggaagtttaagtgttccggctattttggatgtactgcctcctgcg
cagcaagattgtgctggtcgcccggtagacgaaaacggcgataagaaagaaaaaagctgg
tgggagcgtatatttggataa
DBGET
integrated database retrieval system
