Alteromonas mediterranea UM4b: I636_02520
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Entry
I636_02520 CDS
T02723
Name
(GenBank) oligoribonuclease
KO
K13288
oligoribonuclease [EC:3.1.-.-]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
I636_02520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amad03019
]
I636_02520
03009 Ribosome biogenesis [BR:
amad03009
]
I636_02520
Messenger RNA biogenesis [BR:
amad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
I636_02520
Ribosome biogenesis [BR:
amad03009
]
Eukaryotic type
Pre-60S particles
RNases
I636_02520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AGQ00380
LinkDB
All DBs
Position
561369..561914
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AA seq
181 aa
AA seq
DB search
MSKHDSNLVWIDMEMTGLDPETCVVMEIATIVTDAQLNILAEGPVIAVHQSDDVLNNMDE
WCTRVHGESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCGNTIGQDRRFMVKYM
PELEAYFHYRNIDVSTIKELTRRWKPEVLDGFEKKGVHLALDDIRESIEEMRYYREKVFT
I
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacacgacagtaaccttgtttggatagacatggaaatgacagggttagatcct
gaaacctgcgtagttatggaaattgccaccatagttaccgatgcacagcttaatattttg
gctgaaggccccgtaatagcggtacatcaaagtgatgacgtgttaaacaacatggacgag
tggtgcacacgcgttcacggagaaagtgggcttactgcgcgttgccgagagagtaaaata
agcgtagaagaagcatccgcacagactattgcctttttagagcagtgggtagatgcaggt
aaatcaccactgtgtggaaacaccattgggcaagacagacgattcatggttaagtacatg
cccgagcttgaagcttacttccactatagaaatattgatgtaagtacaataaaagagcta
acgcgccgctggaagcctgaagttttagatggtttcgaaaagaaaggcgtacacttagcc
ttagatgatattcgcgagtctattgaagaaatgcgctattatcgagagaaagtgtttacg
atttaa
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