Alteromonas mediterranea UM4b: I636_02970
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Entry
I636_02970 CDS
T02723
Name
(GenBank) sigma S (sigma 38) factor of RNA polymerase, major sigma factor during stationary phase
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
amad
Alteromonas mediterranea UM4b
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amad03021
]
I636_02970
Transcription machinery [BR:
amad03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I636_02970
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KIF21A
Motif
Other DBs
NCBI-ProteinID:
AGQ00466
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Position
complement(648613..649605)
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AA seq
330 aa
AA seq
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MGKSNKALESKSQDDLEVIDMPADMKADEALTNDAELENDDAIFSQDDQPKNLDATQLYL
GEIGFSPLLTAEEEVYFARRSLKGCEASRKRMIVSNLRLVVKIARRYNNRGLALLDLIEE
GNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAS
RELSQKLDHEPTAEEIAAALDKPVEDVTKMLRLNERITSVDTPIGGENDKALLDIIADEK
EFSPEESLQDSDIKSNIITWLEELNPKQREVLARRFGLMGYEPSTLEDVGAEIGLTRERV
RQIQVEALRRLRDMLGHQGLSLENLFDQMK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcaaataaagccttagaatcaaaatctcaagatgacttagaagtcatcgac
atgccagctgatatgaaagctgacgaagccttgaccaacgacgctgaactagaaaatgac
gacgccattttcagtcaggacgaccaacctaaaaacctagatgcaacacagctttatcta
ggcgagattggattttcaccactgctaaccgcagaagaagaagtttattttgcgcgccgc
tcactgaaaggctgcgaggcctctcgtaaacgtatgattgtaagtaacctgcgcctagtc
gttaagattgcacgccgttacaataatcgtgggttggcacttcttgatttaattgaagaa
ggtaatttagggcttattcgcgctgtcgaaaagttcgaccctgaacgcgggttccgcttt
tccacatacgccacgtggtggattcgacaaaccatcgaacgcgccatcatgaatcaaacg
cgtactatccgtttgcccattcatgtggttaaagaactcaatgtttatttacgcgcttca
cgtgaactttctcaaaagttagatcatgagcctactgcagaagaaattgcagcggcacta
gacaagcctgtagaagatgtcacaaagatgcttcgactaaacgaacgcattacctctgtt
gatacgcctattggcggagaaaatgacaaagctttgctcgacattattgctgatgaaaaa
gagttcagccctgaagagagccttcaagactcagacatcaaaagtaatattattacctgg
cttgaagaacttaaccctaaacaacgcgaagtactcgcacgccgttttgggcttatggga
tacgagccatcgacgttggaagatgttggtgcagaaattggcctaacacgtgagcgtgtt
cgtcagattcaagtagaagcactacgccgtcttcgcgatatgctgggccatcaggggctt
tcattagagaatctgttcgaccaaatgaagtag
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