Alteromonas mediterranea UM4b: I636_03055
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Entry
I636_03055 CDS
T02723
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I636_03055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amad03019
]
I636_03055
Messenger RNA biogenesis [BR:
amad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I636_03055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AGQ00483
LinkDB
All DBs
Position
667423..667965
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AA seq
180 aa
AA seq
DB search
MIDADGFRANVGIVICNKMGQVFWARRYGQHSWQFPQGGIDEGESAEQAMYRELHEEVGL
TPKDVTILSVTRNWLRYKLPKRLIRQGSNPVCIGQKQKWFLLQLDCNERDVNVLKTGHPE
FDDWRWVSYWYPIRNVVSFKRDVYRRVMKEFSPVVMSAQHRPQQRQNAAPHKRGKKRRRG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatgccgatggattccgtgcgaatgtgggcatagtgatttgcaacaaaatgggt
caagtattttgggcaagacgttatggtcaacattcatggcagttccctcaaggcggaatt
gatgaaggggaatctgctgaacaagctatgtaccgcgagcttcacgaagaagtagggctg
acaccgaaagatgtcactattttaagtgttacccgtaactggcttagatataagctgccg
aagcgattaattcgacaaggcagcaaccctgtttgtatagggcaaaaacaaaaatggttc
ttgttgcagctcgattgtaacgagcgagacgttaatgtacttaaaacaggtcatcctgaa
ttcgatgactggaggtgggtaagttactggtatccaataagaaacgttgtatcgtttaag
cgcgatgtatacagacgagtaatgaaagagttctcgcctgtagttatgtctgcgcagcat
cggcctcaacagcgccaaaacgcagcgccacacaagcgtggaaaaaagcgcaggcgtggc
taa
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