KEGG   Alteromonas mediterranea UM4b: I636_03185
Entry
I636_03185        CDS       T02723                                 
Name
(GenBank) DNA topoisomerase IV subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
amad  Alteromonas mediterranea UM4b
Brite
KEGG Orthology (KO) [BR:amad00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amad03032]
    I636_03185
   03036 Chromosome and associated proteins [BR:amad03036]
    I636_03185
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:amad02048]
    I636_03185
Enzymes [BR:amad01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     I636_03185
DNA replication proteins [BR:amad03032]
 Prokaryotic type
  DNA Topoisomerases
   I636_03185
Chromosome and associated proteins [BR:amad03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    I636_03185
Prokaryotic defense system [BR:amad02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    I636_03185
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim TOPRIM_C HATPase_c_3
Other DBs
NCBI-ProteinID: AGQ00509
LinkDB
Position
699129..701024
AA seq 631 aa
MSNQYNSDAIEVLNGLDPVKRRPGMYTDTTRPNHLGQEVIDNSVDEALAGHASSIKVILH
EDQSLEVIDDGRGMPVDIHPEEGISGVELILCKLHAGGKFSNKNYAFSGGLHGVGISVVN
ALSNRVEVTIRRDSSVYQIAFENGDKVEDLQVIDTCGKRNTGTRVHFWPDPQYFDSAKFS
VSRLKHNLRAKAVLSPGLRIRFDNKIAKESQEWFYEDGLKDYLYQAVEEFETLPSDTPFV
GNFTGNTEAADWAVMWLPEGGDLVTESYVNLIPTAQGGTHVNGLRQGLLESMREFCEFRN
LMPRGVKLSPDDIWDRCAYILSTKMQDPQFAGQTKERLSSRQASAFVSGVVKDAFSLWLN
QHTEIAEALAEMCINNAQRRLRQTKKVARKKVTQGPALPGKLTDCSSQDISYSELFLVEG
DSAGGSAKQARDREFQAIMPLRGKILNSWEVDSSQVLASQEIHDISVALGIDPDSTDLSG
LRYGKICILADADSDGLHIATLLCALFVRHFRTLVEQGHVYVAMPPLFRIDVGKEVYYAL
DEGEKQGILDRIEAEKKRGKVNVQRFKGLGEMNPLQLRETTMDPNTRRLVQLTIEDAEEM
MELMDMLLAKKRSGDRKTWLESKGNMAEVVL
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgtcaaatcaatacaattcagatgccatcgaggtcttaaatggccttgacccagttaag
cgccgccctggtatgtataccgataccactcgtcctaatcacttagggcaagaggtgatt
gataacagtgtggatgaagcgcttgcgggtcacgcctcgagcatcaaagtaattttgcac
gaagatcaatcgctagaagtcattgatgacggtcgtggtatgccagtagatattcaccct
gaagaggggatatcgggcgtagaacttatcttatgcaaactgcacgctggtggtaagttt
tccaataaaaactatgcgttctcaggcggcttgcacggggtaggtatctcggtagtcaac
gccctttcaaatcgcgttgaagtgactattcgaagagacagcagcgtttatcaaattgca
tttgaaaatggcgacaaagtagaagacttgcaggtcattgatacctgtggcaaacgcaat
accggtacgcgagtccacttttggccggacccacaatacttcgattcggccaagttttcg
gtaagtcgcttgaaacacaacttgcgcgcaaaagcggtgttaagccctggcctacgtatt
cgctttgacaacaaaatcgctaaagaaagccaagaatggttttacgaagacggcttaaaa
gattacctctaccaagccgttgaagaatttgaaacactgccgtcagacacgccgtttgtt
ggcaacttcaccggcaatacggaagccgctgactgggcagtaatgtggctgcccgagggc
ggcgacttagtaacagaaagttacgttaaccttattcctacagcccaaggcggtacacac
gttaacgggctgcgccaaggcctgcttgagtcgatgcgcgaattctgtgagtttagaaac
ttaatgccgcggggcgtaaagctatcacccgacgatatttgggaccgatgcgcctatatc
ctgtcgacgaaaatgcaagatccacagtttgcaggacaaaccaaagagcgcttgtcatca
cgccaagccagtgcgttcgtatctggtgtggttaaagatgcattcagtctatggctaaat
cagcacacggaaattgccgaagcgttggcagaaatgtgtatcaacaacgcgcagcgccgc
ttacgccaaaccaagaaagtcgcgcgtaagaaggtaacgcaagggccagcgttaccagga
aagctcactgactgctcttcacaagatatctcttactctgagctgtttctagtagagggt
gactcggcaggaggctcggctaaacaggctcgcgacagagagtttcaggcgatcatgccg
ctgcgcggtaaaatcctgaatagctgggaagtcgactcttctcaggtactggcatcacaa
gaaattcacgatatttcagtggcgctaggtattgaccctgattcaacagacctgtctggt
ttacgctacggcaaaatttgtattcttgccgatgctgactctgatgggcttcatattgca
accttattatgcgcgttgttcgtacgccactttagaacccttgtcgagcaaggtcatgtg
tacgtcgctatgccgccgctatttagaatagacgtaggcaaagaggtgtattacgcgcta
gatgaaggcgaaaagcagggcattctagatcgtattgaagcagaaaagaaacggggtaaa
gtgaacgtacagcgctttaaaggcctaggtgaaatgaacccgctgcagcttcgcgaaacc
accatggaccctaatactcgccgccttgttcagctgacgattgaagatgctgaagaaatg
atggagcttatggacatgttgcttgctaagaagcgttctggcgatcgcaagacttggcta
gaaagcaaaggaaatatggcagaagtcgtgttgtaa

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