Alteromonas mediterranea UM4b: I636_03720
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Entry
I636_03720 CDS
T02723
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I636_03720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amad03400
]
I636_03720
DNA repair and recombination proteins [BR:
amad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
I636_03720
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
I636_03720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
AGQ00614
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All DBs
Position
829701..830405
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AA seq
234 aa
AA seq
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MNNEWLNAYVLHRRPYRETSYIVDFFSLEEGRISAVAKGVKNSKSDKKSLLQPFQHLRLQ
LSGKSDLKNLRHVESVAPSISLTGIALFCAMYVNELTNRIMPQGLASDGVYSAYEAALLA
LRDEADIEVTLRQLEFALLDEMGLLPDFTSDVEYEMPIEENGRYHFQLDAGFIQIPDDVV
GARGIPGTALLSLSQGEFTPLSKKVAKVLCRDLLKPLIGDKPLKSRELFMTKPR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atgaataacgaatggttaaacgcctatgtattgcatagacgcccttacagggagaccagc
tatattgttgattttttctcgttagaagaaggccgcataagtgccgtcgcaaagggggta
aaaaacagcaagtctgataaaaagagcctgcttcaaccctttcagcatttgcgtctgcag
ctaagtggtaaatctgatttaaagaatttacgtcacgtggaaagtgtagcgccgtcaatt
tccctcactggcatcgctttattttgtgcaatgtatgtcaatgagttgaccaatagaata
atgccccaggggctagccagtgatggagtatatagcgcctatgaagctgcgcttttggcg
ttgcgagatgaagctgacattgaagtgacgttacggcagctagagtttgctcttcttgat
gaaatggggttgcttcctgatttcaccagtgatgttgaatacgaaatgcctattgaagaa
aacggtcgctatcactttcagctagatgctggttttatacagattcccgatgacgtagta
ggggctagaggaattcccggtacagcattacttagcctatctcagggggaattcacacca
ttgagcaaaaaggtcgcaaaggtactgtgtcgcgatttactcaagccgctgattggggac
aagccgttaaaaagtcgagagctatttatgactaaaccgcgctaa
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