Alteromonas mediterranea UM4b: I636_04005
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Entry
I636_04005 CDS
T02723
Name
(GenBank) bifunctional preprotein translocase subunit SecD/SecF
KO
K12257
SecD/SecF fusion protein
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad02024
Quorum sensing
amad03060
Protein export
amad03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
I636_04005
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
I636_04005
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I636_04005
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
amad02044
]
I636_04005
Secretion system [BR:
amad02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
I636_04005
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
Sterol-sensing
Motif
Other DBs
NCBI-ProteinID:
AGQ00671
LinkDB
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Position
880543..883119
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AA seq
858 aa
AA seq
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MARFSFRGVVYVLIVMLGLLSAAPNILPQSVKQQLPTWYTTSTLSLGLDLQGGSHLLLAA
DTNALFAKQLNSFSSDVLSELRTQNVRYTRTSHSLSSKVSSEDSSGSVVFTLRSADDARK
VKDIAYQISAQPNTASALDVAIKQNTVTLTLNELYTEELVKDTLNRSVEVVRKRLNETGL
TEPSVTLQGKDAILVQMPGMSDPTQVKKLLGTTAQMTFHWAANSQSEQVMNKQDVAGNTY
QLEQKVALEGEHITDAAGVLSSETGQPVVTFRLDSAGAKQFATMTRDNIGRVLAIVLDDK
VVTAPVINSVIPGGRGEITGNFTLSEAGNTALMLRTGALPVPLTIIEERTVGPDLGSDAI
QTGVQSGVAGALLVLAFMVAIYGRWGAIASFALCINMVLVFGALTLFGATLTLPGIAGLI
LTMGMAVDANILINERIREESKKGRPAARAIDVGFDKAFATIVDSNFTTLIAVSLLFMFG
SGPIKGFAITIALGLVSSVFTAVALTKVLMLKVVKSKHRNTPDRTQQRLSLRFSSPLLRL
SDKLSGIDFLAKRKIALAISVLLTVLSIGLFAKPGLHYGVDFTGGTMIELTAPALSTDEL
RNVIESNGFDQVAIQEYGNEHHYLLRAPVLDSNGELENSNAKQTDALKRAISQADDTVSF
DKIDMVGPKVSGGFAELSILALLIAGGGMLVYLWARFEAHFATAALLTVLLDLTKTVGFF
ALTGIEFNLTAVAALLALIGYSINDKVVVLDRIRELLRLDPAKPLANTINEAVNSTLSRT
VFTSVTTLLALLPMAIFGGDAVESFAVPMVFAVVVGTSSTLFITSTLLYLLGSRRERQGK
AQLKPTAEEIKASLSHIP
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atggcacgattttcatttcgtggcgttgtgtatgtgctcatcgttatgctcggtttactg
agcgctgcgcccaacatattgccacaatcagttaaacagcagttacccacgtggtatacc
actagcacactttctttaggcttagatttacagggcggatcgcatctgctcttagccgca
gacaccaacgcgttgtttgcgaagcaactcaacagtttttccagcgatgtacttagcgaa
ttacgtacccaaaacgtacgctataccagaacatctcactcgctttcttcaaaggtgagt
agtgaagatagttctggaagcgttgtatttactttgcgcagtgcagatgatgctagaaag
gtcaaagacattgcctatcaaatttccgcgcaaccgaacacagcaagtgcacttgatgtt
gcgataaagcaaaacaccgtcacccttacgcttaatgagttgtacaccgaagagctggtt
aaagacacattaaaccgaagtgtagaggtagttcgaaagcgtttgaacgaaacaggactt
actgagcccagcgttaccttacagggtaaagacgcgattttagtacagatgccaggtatg
tccgatccgacccaagttaaaaagctactgggtactaccgcacaaatgacctttcattgg
gccgcaaacagccagtctgagcaagtaatgaataaacaggatgtcgcaggcaatacctat
caattagagcaaaaggtggcgctagagggtgagcatatcactgatgcggcaggtgtctta
agtagcgaaaccggtcagcccgtagtgacgtttcgattagacagtgccggtgctaagcag
tttgccactatgacccgtgacaacattggccgtgtacttgctatcgtacttgacgacaaa
gtggtgaccgccccggttattaacagcgtgatcccaggtggtcgcggtgaaataaccggt
aactttacgttatctgaagcgggtaataccgcgctaatgcttcgcactggggcgttacct
gtgcctcttaccattatagaagaacgtacggttgggcctgatttaggtagcgatgctata
caaaccggtgtacaaagcggcgtagctggtgctttgttagttttagcatttatggtggct
atttacggcaggtggggggctattgcaagctttgctctgtgtatcaacatggtactcgtg
tttggcgcgttaaccctatttggcgcaacgctgacgttaccgggcattgctggtttgatt
ctgactatgggcatggcggtagacgcgaatatcttgattaatgaacgtattcgcgaagaa
agtaaaaaagggcgtcctgcagcgcgtgcaatagacgtgggctttgataaagcattcgca
acaatcgtcgattcaaacttcactacgcttatcgcagtcagcttgttgtttatgttcggt
agtgggcctatcaaaggttttgctatcaccattgccctcggtcttgtgtcctctgttttt
actgcggttgccttaactaaagtgctaatgctaaaagtggttaagtcgaagcacagaaat
acgccagaccgcactcagcagcgcctttctttgcgcttctcatcaccgcttttacggttg
agcgataagcttagcggtattgattttctggctaaacgtaaaatcgcattagctatttcg
gtattgctaacagtgctctcaatcggattatttgccaaaccaggtttacattatggcgtc
gattttaccggtggcaccatgattgagctgactgcgccagcgctctcgactgacgagtta
cgaaatgtcattgaaagtaatggttttgatcaggtagccattcaagagtatggcaatgag
catcactatttgttgcgagcacctgttctcgacagcaatggcgagcttgaaaatagcaat
gcaaagcagactgacgcgctgaaacgtgcgatttcacaggctgacgacacggtaagcttt
gataaaattgatatggttggtcccaaagttagcggaggtttcgcggagctatctattctt
gcgctgcttatcgccggtggtggcatgttggtgtacctgtgggcgcgttttgaagcgcat
ttcgcgacagcagcattacttactgtgttactcgatttaaccaaaaccgtaggctttttc
gcgttaaccggtattgagtttaacttaaccgctgtcgcggcgttattagcgcttattggt
tattcgataaacgataaagtggtggtgcttgatcgcatccgtgaattactgcgtttagac
ccagctaaacctttagcgaacactatcaatgaagcggtgaacagcacattaagtcgaacg
gtatttacgtcagttaccacgctattagcgctgctcccaatggctatatttggtggtgac
gcagtagaaagttttgcagtgcctatggtctttgctgtcgtagttggcacgtcttcaact
ttgtttattacctctacattactgtatctattgggaagtagaagagagaggcaaggaaaa
gcacagttaaagcccactgcagaagaaattaaggcgtcgttgtcgcatattccttaa
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