Alteromonas mediterranea UM4b: I636_04200
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Entry
I636_04200 CDS
T02723
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amad
Alteromonas mediterranea UM4b
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amad03400
]
I636_04200
DNA repair and recombination proteins [BR:
amad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I636_04200
Archaeal homologous recombinant proteins
I636_04200
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Metallophos
SbcD_C
Metallophos_2
THEG4
Motif
Other DBs
NCBI-ProteinID:
AGQ00710
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Position
934239..935717
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AA seq
492 aa
AA seq
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MKILHTSDWHLGQSFFTKSRKKEHAAFLKWLLQQVEAHHIDAIIVAGDVFDTGTPPSYAR
ELYHAFIGELQGMQCTLVVLGGNHDSVSVLNESKALLKYLNSHVIASTYGEISEQVIALK
NRKGQPSAVLCVVPFIRPRDVLVSESGQNATDKRQALGNAIKQHYASLYSEALTLRNTLE
NNRLEEGIGHSAAIPIIATGHLTALGVSQSESVRDIYIGTLEGFDAKGFPPADYIALGHI
HRPQKVAKTEHIRYSGSPIPLSFDELTSQKQIVLVEFDGVSTTPNISTLPVPRFQAMEVI
KGDLKAIEAMINESEAIAYASLANEDQNASSEPLASHEASSSNEKPFGSKDPVWLCIEVE
TEDYLTDLQQRIQGLLEGKNAEILQLKRMRKRTVKSLSKKQNVQLSELSVNEVFEARLVL
ESLDEEPNETSNEASELPQKNTEPSRIKRIKHLFAEAVALVHTNKEDLENSEGLVQSKPA
SESEPNKETQGD
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattgcatacatctgactggcatttaggtcagagtttttttacgaaaagtcgc
aaaaaagaacatgccgctttccttaaatggcttctccaacaagtagaagcgcatcatata
gatgcgattattgtcgcgggcgatgtgtttgacactggcacgccgccgagctatgcccga
gagctataccatgcgtttatcggtgaattacaaggcatgcagtgtacgctagtggtgctg
gggggaaatcatgactcggtgtcggtactaaatgaaagcaaggcgctactgaaatattta
aatagtcatgtgatagccagtacatatggagaaataagtgaacaggtcattgcgcttaaa
aaccgcaagggccagcccagtgccgtgctttgtgttgtgccatttattcgccctcgtgat
gtattggtaagtgagtcagggcaaaacgcaactgacaagcgccaagcgctgggcaatgca
ataaaacagcactatgcgtcgctttatagtgaagccctaacactacgcaacacattggaa
aataatcgattagaagagggcattggtcatagcgctgctattcccattatcgccacgggg
catttaaccgccttgggtgtaagtcagtctgaaagtgtgcgtgatatctacattggcacc
cttgaaggctttgacgccaaaggttttccgccagccgactatatcgcattaggccacatc
catagaccccaaaaggtagcgaaaaccgaacacattcgctattcaggctcgcctataccg
ctaagctttgatgaattaacttctcaaaaacaaatcgtgctggtggagtttgacggggta
agcacgacacccaatatctcaacccttccagtacctcgttttcaagccatggaagtaata
aaaggggacttaaaagcgattgaggcgatgattaatgaaagcgaagccatagcctatgct
tccctagcaaacgaagaccaaaacgccagttcagaacctctcgctagccatgaagcttct
agttctaacgaaaaaccttttggctcaaaagaccccgtgtggttgtgtattgaggttgaa
accgaagactacctgactgatttacagcagcgaattcagggcttattagaaggtaaaaac
gctgaaattcttcagctaaaacgcatgcgtaagcgcacggtgaaaagcctgagcaaaaag
caaaatgtacagcttagcgagctgtcagtgaacgaggtttttgaagcgcgcttagtgcta
gagtcgttggatgaggaacctaatgaaacgtccaacgaggcttcagaactgccgcagaaa
aatactgagccgtcacgtattaagcgtattaaacatttgtttgccgaagccgtagcgcta
gtgcataccaataaagaagacttagaaaacagcgaagggctagtacaatcaaagcctgca
agcgaatctgaaccaaacaaagaaacgcagggcgattga
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