Alteromonas mediterranea UM4b: I636_05540
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Entry
I636_05540 CDS
T02723
Name
(GenBank) sigma-54 depedent transcriptional activator PspF
KO
K03974
psp operon transcriptional activator
Organism
amad
Alteromonas mediterranea UM4b
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amad03000
]
I636_05540
Transcription factors [BR:
amad03000
]
Prokaryotic type
Other transcription factors
Others
I636_05540
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
Mg_chelatase
AAA_5
HTH_8
AAA_2
AAA
bpMoxR
AAA_16
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AGQ00970
LinkDB
All DBs
Position
complement(1220976..1222097)
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AA seq
373 aa
AA seq
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MSRYRQQDNLLGQANSFLEVLEQISQIAPLDKPVLVIGERGTGKELIAARLHFLSKRWDQ
NYIKLNCAALNESLLESELFGYEAGAFTGASKRREGRFEVAHNGTLFLDELANTSGLIQE
KLLRVVEYGEFERVGGSKSVKTDVRLIAATNEDLPALADAGEFRADLLDRLAFDVITIPP
LRERREDIMMLAENFAINMAREMEMELFSGFTEKAKRTLLDYDWPGNIRELKNVVERAVY
RTNNPHLPVHEIILDPFESVYRPQGRVKTKDRVSTSESASPIVSSQPDHTKDVIESADIT
PLTPSNQQESVEYPIDLKERSQQYEIDMIKQALADSQFNQKKTAEKLSLTYHQLRGYLKK
YNLLDSSAESVEA
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggtatcgtcagcaagacaatttgctaggtcaagcgaacagttttctagaagtg
ctagagcaaatttcacaaatagcaccgttagataaaccggtccttgtgataggagagcga
ggtacaggtaaagaactgattgcagcgcgtcttcacttcttatctaagcgctgggaccaa
aactatatcaaactgaattgcgcagccctaaatgaaagccttttagaaagtgagcttttc
ggttacgaagctggggcatttaccggtgcgtcgaaacgacgagaaggtcgttttgaagtc
gcccataacggcacactgtttctcgatgaacttgccaatacttcgggtctaattcaagaa
aagctccttcgcgttgtcgaatatggggagtttgaacgcgtgggcggcagtaaatcggtg
aaaaccgatgtaaggcttattgcagcgacaaatgaagatctccctgcccttgccgatgca
ggcgagtttcgcgccgacttgctagataggctagccttcgatgtgattaccatccccccg
cttcgagagcgacgggaagatatcatgatgttagcggaaaattttgccattaatatggcc
cgtgagatggagatggagctctttagcggcttcactgaaaaagccaagcgtactctgctt
gattacgattggcccggaaatattcgagaactgaaaaatgtagttgagcgcgccgtttac
cgcactaacaaccctcacctaccggttcacgaaatcattcttgacccctttgaatccgtt
tatcgtccacagggtagagttaagactaaggatagagtaagcacttctgagtcagcaagt
cctatcgtgtcctcacaacccgaccatacaaaagatgtgatagaaagcgctgacattacg
cctttaacgccaagcaatcagcaagaatctgtcgaatatcccatagatttgaaagaacgc
tctcaacaatatgagatagatatgataaaacaggcacttgctgacagtcagtttaatcaa
aagaaaaccgctgaaaaattgagcctgacatatcatcagctgcgtggctatctcaaaaaa
tataacttactagattcttccgctgaaagcgtcgaggcgtaa
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