Alteromonas mediterranea UM4b: I636_06985
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Entry
I636_06985 CDS
T02723
Name
(GenBank) holliday junction resolvase
KO
K01159
crossover junction endodeoxyribonuclease RuvC [EC:
3.1.21.10
]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
I636_06985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amad03400
]
I636_06985
Enzymes [BR:
amad01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.10 crossover junction endodeoxyribonuclease
I636_06985
DNA repair and recombination proteins [BR:
amad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I636_06985
RecFOR pathway proteins
I636_06985
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvC
Motif
Other DBs
NCBI-ProteinID:
AGQ01253
LinkDB
All DBs
Position
1537108..1537626
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AA seq
172 aa
AA seq
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MVILGIDPGSRITGYGLIARKQGKLVYVASGCIRVGTADLPSRLANIFTGVGDIIRQYKP
DQFAIEQVFMAKNPDSALKLGQARGAAIVAATQAQLPVAEYSARQIKQSVVGKGGADKTQ
VQHMVKHLLNLSGTPQADAADALAVALCHAHTEQSLINMAGQARKTVRGRLR
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atggttatactgggtatagatccaggttctcggattacaggctacggtttaattgcgcgt
aagcaaggtaaactcgtgtatgtggctagcggttgtattcgcgttggtacggcagatttg
ccttctcgccttgcaaatatttttaccggtgttggcgatattattcgtcaatataaaccc
gaccagtttgctattgagcaagtatttatggcgaaaaaccctgattcagcgctaaagctt
ggtcaggccagaggggccgccattgtggcagccacgcaagcgcaacttcctgttgctgaa
tacagcgcaaggcaaataaagcagtcggtagttggaaaaggtggcgcagataaaacacaa
gttcagcatatggtaaagcacctgttgaatttaagtggcaccccacaagccgatgccgca
gatgccttggccgttgccttgtgtcatgcacataccgaacagagcctgataaacatggca
gggcaagcccgaaaaaccgttcgcggccgcttgcgttaa
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