Alteromonas mediterranea UM4b: I636_10400
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Entry
I636_10400 CDS
T02723
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
amad
Alteromonas mediterranea UM4b
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amad03400
]
I636_10400
Enzymes [BR:
amad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
I636_10400
DNA repair and recombination proteins [BR:
amad03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
I636_10400
Prokaryotic type
I636_10400
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AGQ01932
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All DBs
Position
2345310..2346734
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AA seq
474 aa
AA seq
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MTVPVSIMWFRQDLRVKDNPALNAACDMGKIVPIYIFDESAPDGRMPGGASKWWLHHSLK
SLNKRLNGHLQIFKGDPQTLIPKLMESFNASSIFWNRCYEPWQINRDKAIKKSLLDSDYE
AHSFNGSLLWEPMKVLKKDGTPYRVFTPYYKNGCLQIEEPRYPKAPPARITYADVDDNSD
GLAALALLPTIKWDDTIAKEWTPGEDGAADNLSDFIENSARRYKDGRDIPSAKGTSRLSP
HLHFGEVSPNQVWYAIKDRFGTSEDKSIETYLSELGWREFSYYLLFHFPTLPNKNFNDKF
DKFPWRTDAKALKAWQTGNTGIPIVDAGMRELWQTGYMHNRVRMIVGSFLVKNLLLSWHE
GERWFWDTLLDADLASNSASWQWVAGSGADAAPYFRIFNPILQGEKFDKKGGYVRQYCPE
LNGLSDKYIHKPWEAPSAILKEAGVELGKDYPKPIVDLKASRQRALDAFQTLKE
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgttcctgtaagcattatgtggtttagacaagaccttcgcgtaaaagacaaccct
gcattgaatgcagcgtgtgacatgggaaaaatcgttcccatctacatatttgatgaaagt
gcgccagatggcagaatgcctggcggtgcaagcaagtggtggcttcaccattcgttaaaa
tctttaaacaaacggctgaacggtcatctacaaatttttaaaggcgatccacaaactctc
attccaaagctcatggagtcctttaatgcatcgtctatcttttggaaccggtgttacgag
ccatggcaaattaaccgtgacaaagccattaaaaagtcacttctagatagtgactacgag
gcgcatagctttaacggtagtttattgtgggagccaatgaaggtactcaaaaaagatggt
acgccttatcgagtttttaccccttactacaaaaatggctgtctacagattgaagagcca
cgctacccgaaggcacctccagcacgtattacctatgcagatgttgacgataacagcgat
ggcttagccgcgttagcgttgcttccgaccataaaatgggatgacaccattgccaaggag
tggacgcctggcgaagatggcgcggcagataatctgtctgactttattgaaaactcagca
cgaaggtataaagacggcagagacattccttcggcgaaaggaacttcacgactgtcaccg
catttacattttggcgaagtgtcaccaaaccaagtttggtacgccataaaagataggttc
gggactagcgaagacaaaagcatcgagacttatctcagtgaacttggttggcgagaattc
agctattaccttctgtttcactttcctacgctaccgaataaaaacttcaacgataagttt
gacaaatttccatggcgtactgacgcaaaagcgctaaaagcgtggcaaaccggtaataca
ggaattcctattgttgatgcgggtatgcgtgaactgtggcaaacaggctacatgcacaac
cgcgttcgcatgattgtgggatcatttttagtcaaaaatttgttattgagctggcatgaa
ggtgaacgctggttttgggataccttacttgatgccgacttagccagtaatagcgctagt
tggcaatgggtagcaggctcaggggcagatgccgcaccgtacttcagaatttttaatccc
atcctccaaggtgaaaagtttgataagaaaggcggctatgttcgtcaatattgccccgaa
ctaaatggactgtctgataaatacatccacaagccctgggaagcaccatctgctatattg
aaagaggcgggtgttgagcttggtaaggattaccctaagcctattgttgatttaaaggca
tcacgccagcgagcactagacgcgtttcaaacattaaaagagtag
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