Alteromonas mediterranea UM4b: I636_10405
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Entry
I636_10405 CDS
T02723
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
amad
Alteromonas mediterranea UM4b
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amad03400
]
I636_10405
Enzymes [BR:
amad01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
I636_10405
DNA repair and recombination proteins [BR:
amad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
I636_10405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AGQ01933
LinkDB
All DBs
Position
2346738..2348276
Genome browser
AA seq
512 aa
AA seq
DB search
MAALILVLGDQLTDSLPVIAGAVKSKDTILMAEVREEATYVKHHKKKIAFLFSAMRHFAE
HLRDNNYQVNYVHYTNEGNQGDLLAQVRHTLSRQHFDEVKVTVPGEYRLLKSMQQWQNQL
GIPVTICEDNRFFSTPNEFSEWADGKKQLRMEFFYREMRRKHYVLMDGKKPIGGKWNYDA
QNRESMPETQKVPKHTTFAIDDITSDVIELVKSEFSEHFGDIDNFHFAVTRKDALSVLNT
FIEERLANFGQYQDAMVEGKPWLYHSHIAFYLNCGLLTPKEAIQAAEQAYHAGQVPLNSA
EGFIRQILGWREYVRGFYWHFMPNLKTDNYFDNSRALPSFFWDAQTNMNCMRQCIKETQQ
NAYAHHIQRLMVIGNFSLLTELSPEEVQAWYLLVYADAYEWVELPNVAGMILYSDGGNLA
SKPYVASGSYINKMSNYCKNCGYQVSKKTGPKACPFNYLYWHFIDKHKEKLSNNHRMAMI
YKTYGRMKEENIETMKQDAAIFLTKLTNDEEV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacttattttagtcctaggtgaccagctcaccgactcattaccagtaatagcg
ggcgccgtaaaaagcaaagacaccattcttatggcagaagtgcgggaagaagctacctat
gtaaagcatcataaaaagaagatcgctttcctgtttagtgccatgcgtcattttgctgaa
catttgcgcgacaataactatcaggttaactacgtccactataccaatgaaggcaaccag
ggtgatttactcgcacaagtaaggcatacgttaagtcggcagcactttgatgaagttaag
gtaactgtgcctggggaatatcggctgcttaaaagcatgcagcagtggcaaaatcaacta
ggtatacccgttactatttgcgaagataatcgctttttctctacccccaatgaatttagt
gaatgggccgatggaaaaaagcagcttcgcatggagttcttttatcgggaaatgaggcgc
aagcactatgtgttgatggatggtaaaaaacctattggggggaaatggaactatgacgcg
caaaatcgcgagtctatgcctgaaacccaaaaggtgccaaaacacaccacattcgctatt
gacgatattacttcagatgttatcgaattagtaaaaagtgaattcagcgaacattttggc
gatattgataattttcactttgcggtcacgcgaaaagatgcactcagcgttttgaacacc
ttcatcgaagagaggctagcaaatttcggtcagtatcaagacgctatggtcgagggaaag
ccttggctttatcattcacatatcgcgttctacttaaactgtggccttcttacaccgaaa
gaagccattcaagccgccgaacaagcctaccacgcagggcaagtgccgctaaattctgcg
gaagggtttatccgacaaattctgggatggcgcgagtatgttcgcggtttctattggcac
ttcatgcctaacttgaagaccgataattacttcgataatagtagagcgctaccttctttt
ttctgggatgcgcagaccaacatgaactgtatgcgtcagtgcattaaagagactcagcaa
aatgcctatgctcatcatattcaacggctaatggtaataggcaatttcagcttgttaacc
gaactgagccctgaagaggtacaagcttggtatttgctggtttatgccgatgcttatgaa
tgggttgaactgcccaatgtcgcgggaatgattttgtacagcgacggtggaaacttagca
agtaaaccctacgtcgctagcggtagctatatcaataaaatgagtaactactgcaaaaac
tgtggctatcaggtttcgaagaaaacgggaccaaaagcttgtcccttcaactacctatac
tggcatttcattgataaacacaaagaaaagcttagcaacaatcatcgtatggcaatgatt
tataagacctatgggcggatgaaagaagaaaatatagagactatgaagcaggatgcagca
atattcttaactaagcttaccaacgatgaagaagtctaa
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