Alteromonas mediterranea UM4b: I636_10685
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Entry
I636_10685 CDS
T02723
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
amad
Alteromonas mediterranea UM4b
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amad03032
]
I636_10685
03036 Chromosome and associated proteins [BR:
amad03036
]
I636_10685
03400 DNA repair and recombination proteins [BR:
amad03400
]
I636_10685
DNA replication proteins [BR:
amad03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
I636_10685
Chromosome and associated proteins [BR:
amad03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
I636_10685
DNA repair and recombination proteins [BR:
amad03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
I636_10685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-DNA_bdg
HU-CCDC81_euk_2
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
AGQ01989
LinkDB
All DBs
Position
complement(2405708..2405995)
Genome browser
AA seq
95 aa
AA seq
DB search
MTKSELIERLADQARHIPAKELELAIKELLEQMAQTLQKGERIEIRGFGSFSLHYRAPRV
GRNPKTGETVKLDGKYVPHFKPGKELRERVDASIA
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaattaattgaacggctcgcggatcaagcgcgtcatattccggcgaaa
gaactcgaactggcaattaaagaacttctagaacaaatggcgcaaacacttcaaaagggt
gagcgtattgaaattagaggttttggtagcttttcgcttcactaccgcgcacctcgcgta
ggtagaaaccctaaaacgggtgaaaccgtaaagctagatggtaagtatgtaccgcacttt
aagcctggtaaggaacttcgcgaaagggtagacgcctcaatcgcataa
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integrated database retrieval system
