Alteromonas mediterranea UM4b: I636_12325
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Entry
I636_12325 CDS
T02723
Name
(GenBank) acyl-CoA synthase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad00061
Fatty acid biosynthesis
amad00071
Fatty acid degradation
amad01100
Metabolic pathways
amad01212
Fatty acid metabolism
amad02024
Quorum sensing
amad04146
Peroxisome
Module
amad_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
I636_12325
00071 Fatty acid degradation
I636_12325
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
I636_12325
09145 Cellular community - prokaryotes
02024 Quorum sensing
I636_12325
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
amad01004
]
I636_12325
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
amad04147
]
I636_12325
Enzymes [BR:
amad01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
I636_12325
Lipid biosynthesis proteins [BR:
amad01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
I636_12325
Exosome [BR:
amad04147
]
Exosomal proteins
Exosomal proteins of breast milk
I636_12325
Exosomal proteins of breast cancer cells
I636_12325
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_2
KH_DUF2096_C
Motif
Other DBs
NCBI-ProteinID:
AGQ02312
LinkDB
All DBs
Position
complement(2777398..2778963)
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AA seq
521 aa
AA seq
DB search
MAGVFHQCGQSICKRTRDEMDERARIIAHALAEQGVCDNDVVAIFMRNHVDIFEIVEACR
YVGSRYVLLNWHSPIVELVPILDDCGAKVLFAHRDLLKGENDLKPLSLVPTLSAIYTIKT
PKSILERYHLTDNSLLASEPKAGEQYQCFDTLLAAPNAKRHSKPPKRFKGMFPYTSGSTG
KPKGIKRDEDLTRPDPYLIFKGLSEALMQLSIGDRFFVSAPLYHSAPHALTLCCLAAGNI
DVYIEPQFDPERFLQDIERFKLTHAYIVPTMMVRLLKLPESIRSKYDTSSLRFALSTGSA
LPGDVKEAMINWFGPIFYESYGTSELGFMTLISSQEALEKPNSVGKPIPGAALKILSDNK
EACEVGDVGVIYAHLSMFAPFKYTNTTGTPSDLHVGEFTTLGDMGYVDEDGYLYICDRKK
DMIISGGANIFPAEIESVIIEMPEVADCAVFGVSDAEYGEKVVVAVQCSPGNTLSIDTLH
GYLGGKLARFKWPKMLQILDALPREDTGKIFKNKLRAQFSQ
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcgtgtttcaccaatgtggtcaaagcatttgcaaacgcactagagacgaaatg
gatgaacgtgcacgtatcatcgcgcatgcacttgctgagcaaggtgtgtgcgataacgat
gtggtagccatttttatgcgaaaccacgtcgacatattcgaaatagtagaggcatgtcga
tatgtgggctcgcgctatgttttacttaattggcacagccctattgtcgaacttgtgcct
attctggacgactgcggtgctaaagtgctgttcgctcatcgcgatttactaaagggtgag
aatgacctcaaaccattgtcactcgttcccaccttgtcagcgatatacacgattaaaacg
ccaaaaagcattttagagcgctatcatcttacagataattcactgttagcatccgagccg
aaagctggggaacagtaccagtgctttgatacgctattagctgccccaaacgcaaagcgg
cacagtaaaccgccaaaacgttttaaaggcatgtttccctacacatctggcagtaccgga
aaacctaaaggtattaagcgagatgaagacctaacgcggccagacccgtatttgatattt
aaggggctgtctgaagcattaatgcagctatcaataggtgatcgctttttcgtctcggca
ccactttatcacagtgcaccacacgcgcttacgctctgctgtctggcagcgggtaatatt
gatgtatacattgagcctcaattcgaccccgaacgctttttacaggacatagagcggttt
aaactgactcacgcttatattgttcccactatgatggtgaggctacttaaactgcccgag
tcgataagaagcaaatacgacacctcaagcttgcgttttgccttatcaacggggtctgca
ctgccaggcgacgtgaaagaagcaatgattaactggtttggtccaattttctatgagtct
tacggcactagcgaattaggctttatgaccttaatttcatctcaagaggcattagagaag
cctaattctgtgggcaagcccattcccggtgcagcacttaaaatactgagcgacaataaa
gaggcttgtgaagtaggggacgttggcgttatatacgcgcatctttctatgttcgcgcca
ttcaaatataccaatactacgggcacgccgagtgacttacatgttggtgaattcacgaca
ttaggcgatatgggttatgtggacgaagatggctacttatatatttgtgataggaaaaaa
gacatgatcatctcaggtggcgccaatatatttcctgctgaaatagaaagcgtcatcata
gaaatgcctgaggttgcagactgtgcggtattcggtgtgtctgatgctgagtatggcgaa
aaagtcgtggtggctgttcaatgctcacccggcaatacgctttctattgataccctacac
gggtatttaggtggcaagctagcgcggttcaagtggcctaaaatgttgcaaatactcgat
gctctgcccagagaagatacgggtaaaatatttaagaacaaacttagagctcaatttagt
caataa
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