Alteromonas mediterranea UM4b: I636_16790
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Entry
I636_16790 CDS
T02723
Name
(GenBank) bifunctional biotin operon repressor/biotin synthetase BirA
KO
K03524
BirA family transcriptional regulator, biotin operon repressor / biotin---[acetyl-CoA-carboxylase] ligase [EC:
6.3.4.15
]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad00780
Biotin metabolism
amad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00780 Biotin metabolism
I636_16790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amad03000
]
I636_16790
Enzymes [BR:
amad01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.15 biotin---[biotin carboxyl-carrier protein] ligase
I636_16790
Transcription factors [BR:
amad03000
]
Prokaryotic type
Helix-turn-helix
Other families
I636_16790
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Ortholog
Paralog
GFIT
Motif
Pfam:
BPL_LplA_LipB
HTH_11
BPL_C
HTH_29
PF0610-like_N
LplA-B_cat
HTH_40
Rrf2
HTH_28
HTH_36
HTH_24
GntR
Motif
Other DBs
NCBI-ProteinID:
AGQ03188
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Position
complement(3786398..3787384)
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AA seq
328 aa
AA seq
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MRQASKAIRKHILALLSDGHFHSGETIAQQVGLSRTAVAGHISQLADWGLDVFKVKGKGY
RLERGFPLLSADSIKRHLGNTKRAVIDVESVLPSTNTEMKKRIASKREDLENGDVVFAEI
QTDGRGRHGRSWLAPVGGSLTFSMYWSFPDGYQSMAGLSLLVGLAVCDALKEFGVEDAEL
KWPNDIYLQGKKLAGVLIEVEGQIGATAHSVIGIGLNVCVPDNQYDVGQPHSDLASYLGT
IPDRNALAAEIIKSLWSYLPKFTQQGFGPFTAYWEALDLYADKRIVLQMGEKRFSGIDRG
VDASGALLVETQDGITRFHGGEVSLRGN
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgagacaagcatcaaaagctataagaaaacatatactcgctttgttgtctgacggccat
tttcactcaggtgaaaccattgctcagcaggtcggtttatcaagaaccgcggtagcgggc
cacatttcccagcttgccgattgggggttggatgtatttaaagtgaaaggtaaaggctac
cgattagaacgagggttcccattgttaagtgctgacagtattaaacgacatttaggcaat
acaaaacgcgcggtcatcgatgtggagtccgtattgccctctaccaatacggaaatgaaa
aaacgtattgcgagtaaacgggaagatcttgaaaacggcgatgtcgtcttcgccgaaatt
caaaccgatgggcgcggtcgccacggccgttcttggttagcccctgttggtggtagtcta
actttctctatgtactggtctttccctgatggttaccaaagcatggcgggtctttctttg
ctagtggggttagccgtttgcgatgcattaaaagaatttggtgttgaagatgccgaattg
aaatggccgaacgatatttatctacaaggcaaaaagcttgccggtgtattaattgaagta
gaaggccagattggcgcaacggcgcacagtgttattggtattggtttaaatgtatgtgta
cctgataatcagtatgatgtagggcagcctcatagcgatttagcctcttacctaggtacc
attcctgatagaaacgccttagcggcagaaataattaagtcgctttggtcttatttaccg
aaatttacccagcaagggtttggtcctttcactgcgtattgggaagcgttagacctatac
gccgataaacgtattgttttgcagatgggcgagaagcgattttctggaattgacagggga
gtggacgccagcggcgcactacttgttgaaacacaagacggtattacgcgattccatggt
ggcgaagttagccttagaggcaattaa
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