Alteromonas mediterranea UM4b: I636_17930
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Entry
I636_17930 CDS
T02723
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad02024
Quorum sensing
amad03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I636_17930
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I636_17930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amad03019
]
I636_17930
03036 Chromosome and associated proteins [BR:
amad03036
]
I636_17930
Messenger RNA biogenesis [BR:
amad03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
I636_17930
Chromosome and associated proteins [BR:
amad03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
I636_17930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
LSM
Hfq_1
Motif
Other DBs
NCBI-ProteinID:
AGQ03410
LinkDB
All DBs
Position
complement(4061684..4061932)
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AA seq
82 aa
AA seq
DB search
MAKGQSLQDPFLNALRKERIPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPARAITMPSAGDSENTKGE
NT seq
249 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagggcaatctttacaagacccattcttaaacgctttgcgtaaggaacgtata
ccagtatcaatttatctggtaaacggtatcaaacttcaggggcaggttgagtcattcgac
cagttcgttattctactgaagaacacagtaagccaaatggtgtataagcacgcaatttct
actgttgttccagcacgcgctatcacaatgccaagcgcaggagattctgaaaatactaaa
ggtgaataa
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