Alteromonas mediterranea UM4b: I636_18320
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Entry
I636_18320 CDS
T02723
Name
(GenBank) ada regulatory protein
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
I636_18320
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amad03000
]
I636_18320
03400 DNA repair and recombination proteins [BR:
amad03400
]
I636_18320
Enzymes [BR:
amad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
I636_18320
Transcription factors [BR:
amad03000
]
Prokaryotic type
Helix-turn-helix
AraC family
I636_18320
DNA repair and recombination proteins [BR:
amad03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
I636_18320
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ada_Zn_binding
AlkA_N
HTH_18
HTH_AraC
DUF6233
SAYSvFN
DUF3196
Motif
Other DBs
NCBI-ProteinID:
AGQ03486
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Position
complement(4147988..4149415)
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AA seq
475 aa
AA seq
DB search
MSDSKASQNEALTESVFSKARLSRDPRFDGRFFVGVKTTGIFCRPICPARLPKEDNVTYY
QLAAQAMADGYRPCFRCRPDSAPSSAAWKGVGATVGRALSLLSSLPTERVGDIATRLGIS
ERYLNKLVVNAVGMGPKKFQNMQRTLFAKQLIQQTHLSMTDIATTAGYQSLRQLQRAVEQ
FCATTPSKLRKKEPATQKVITLFLSYRPPYNWPYVREFLAARAISGMEVVSDNSYGRYFS
CGESIGYFNAVHNEARHGFELHIDMPDLRNLHKTIENIKLLLDLHADPLLIEESLKQAGL
PDNALTAGLRLPSAWSVFESGCRAIVGQQVSVKAAIGQVTLLVHQLGKKGAVSDKYNTNS
TAYYCFPTPEAVAGNNLAFLRMPQARKEAVRQFACLFLNDKVPNHKEILAIKGVGPWTLD
YLKMRGERNPDVYLEGDLIVRKMAQRYPVEPAQAAPWRSYLTLQLWQLSNQQKEV
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacagcaaggcttcccaaaacgaggcattaaccgaatcggtcttttcaaaggca
aggcttagccgagatccccgattcgacgggcgtttctttgtgggcgtaaaaacgaccgga
atattttgcaggcctatttgcccggcaaggctccctaaagaagacaatgtcacttattac
cagcttgcagcgcaagcgatggcggatggctatcgcccttgctttcggtgtaggcctgac
agcgcgccaagctctgccgcgtggaaaggcgtaggggcaaccgtagggcgggcgttgtcg
cttctttcttcccttcctacagagcgcgtgggtgatattgcgacgcgccttggtataagc
gagcggtatctcaataagctggtggtgaatgcggtaggtatggggcctaaaaagtttcaa
aatatgcagcgtacgctatttgctaaacagcttattcaacaaacccatttgtctatgaca
gatatcgctacaacagcaggttatcagtcacttcgacaattgcagcgtgcggtagagcag
ttctgtgctaccacgccctctaagctaaggaaaaaagagcccgctacccaaaaggtgatt
acattgtttctttcttatcggccgccttacaactggccttacgtcagagagtttttagcc
gcacgcgctatttcaggtatggaagtcgttagtgataacagctacgggcgctatttttct
tgtggtgaaagtattggctatttcaacgcggtgcataatgaagctcgccatggctttgag
ttgcatattgatatgccagatttacgcaacctgcataaaacgattgaaaatatcaagtta
ttactcgaccttcacgctgacccactgcttattgaagagagtttaaagcaagcaggctta
cctgataatgcattaactgcggggttacggctaccgagcgcttggagtgtatttgaaagt
ggatgtcgcgctattgtaggccaacaagttagcgttaaagcggccatcggacaggttacg
ctgctggtacatcagttagggaaaaaaggcgctgtatccgacaagtacaataccaactca
acagcatactattgcttcccaacacccgaagcggttgcggggaataacttggcgtttctg
cgtatgccgcaagcaagaaaagaggctgtgcggcagtttgcctgtttatttttgaatgat
aaggtaccaaaccacaaggaaatactggcaataaagggggtggggccctggacgttagat
tatttgaaaatgagaggtgagcgaaaccctgacgtttaccttgaaggcgatttaattgtg
cgaaaaatggcgcagcgatatcctgtagaacctgcacaggccgcaccatggcgtagctat
ttaacccttcagttgtggcaacttagcaatcaacaaaaagaggtctag
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