Alteromonas mediterranea UM4b: I636_18955
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Entry
I636_18955 CDS
T02723
Name
(GenBank) glycoside hydrolase family 51 domain-containing protein
KO
K01209
alpha-L-arabinofuranosidase [EC:
3.2.1.55
]
Organism
amad
Alteromonas mediterranea UM4b
Pathway
amad00520
Amino sugar and nucleotide sugar metabolism
amad01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
I636_18955
Enzymes [BR:
amad01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.55 non-reducing end alpha-L-arabinofuranosidase
I636_18955
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Gene cluster
GFIT
Motif
Pfam:
Alpha-L-AF_C
ASD1_dom
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
AGQ03610
LinkDB
All DBs
Position
complement(4293249..4294805)
Genome browser
AA seq
518 aa
AA seq
DB search
MFKVKPLLFYCFSVLATSSVATAADVQINIDVDSPGPTLNKNIYGQFMEHLGRGIYEGIW
VGEDSSIPNQDGFRLDVLQALRDLKVPLLRWPGGCFADEYHWRDGIGPQDKRPRTVNSNW
GGVIEDNAFGTHEFFQFAELLGAQTYVNGNLGTGNPREMVEWLHYMTSDADTSIVRQRKR
NGRDKPFKVDYFAIGNESWGCGGNMTPEYYADLYKQYSAFLKAPEDNQPKFIASGGTDDQ
TEWTKVLTEKIKSSWSLKMDAISHHYYTLPTGDWSNKGSATVFPENQWYSAIQRTLQIEA
FIKKNLAVLEEMDPENKIGFYVDEWGTWYDVDEGTNPGFLYQQNTLRDAIIAGLNIHVFN
RHAERVQMTVIAQMVNVLQAMILTDKERMILTPTYHAFKMHIPFQDATYLPVSFSQSLSN
NHGEISIPSISASAAKAQDGNTYISIVNTQLNKAIEVELNQVKKVNGLVLTSDKMDEHNT
FDNPNNIQPNDYATDVKDGKAFIVVPAKSLMVLNLGQL
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaagtaaagccgttgctattttattgcttttcggtgctagcgacatcgtcggtg
gccaccgccgctgacgtacagataaatattgatgttgatagcccagggccgacactgaat
aaaaatatctatggccagtttatggaacatttgggcagaggcatttatgaaggcatttgg
gtaggtgaagactcgagcatacctaatcaggatggtttccgattagatgtacttcaagcg
ttgcgagacttaaaagtaccattactgcgttggccgggtggctgctttgctgatgagtat
cattggcgagatgggattggtccgcaagataaacgcccaagaacagtcaatagtaattgg
ggaggcgttattgaagataatgcgtttggcacccatgaattttttcaattcgcagagttg
ttaggcgcccagacttacgtcaacggcaatttgggaacaggcaatccgcgtgaaatggta
gagtggctgcactacatgacttctgatgcagatacatcgattgttcgccagcgcaaaaga
aacggtcgggataagccatttaaagtggactactttgccattggcaatgaaagctggggc
tgtggcggcaacatgacacctgagtattatgctgacctttacaagcagtattcggcattt
ctaaaagcccctgaagacaatcaacccaagtttattgccagcggtggtactgacgaccaa
acggaatggacaaaagtgctcaccgagaaaataaaatcctcgtggagtctaaaaatggat
gcgataagccatcattactacacacttccgactggagattggagcaataaaggtagcgcc
actgttttccctgaaaaccaatggtattcagcgatacagcgcacattgcaaattgaagca
tttataaagaagaacctagccgttcttgaagaaatggaccctgaaaataaaattggtttt
tatgtcgacgaatggggaacatggtacgacgtagatgaggggaccaaccctggctttttg
taccaacaaaatacattgagagatgcgattatcgcgggactaaatatccatgttttcaat
cgtcacgccgaacgtgtacaaatgacagtgatcgcgcagatggttaacgtactgcaagcg
atgatactcactgataaagaaagaatgattttaacgccaacctatcacgcgtttaaaatg
cacattccgtttcaagacgcgacctatcttcctgtgagttttagccagtcactatcaaac
aatcacggtgagataagtattccaagtatcagcgcttcagcagccaaggcacaagatggc
aatacctatatttctattgtgaatacacagttgaataaagcaattgaagtcgagcttaat
caggtaaaaaaagtcaatgggttagtattaaccagcgataaaatggacgaacacaatacc
tttgataatccgaacaatattcaacctaatgactacgccacagacgttaaagatggcaag
gccttcatagtcgttccggcaaagtctttaatggtacttaatttaggccaactttaa
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