Alteromonas mediterranea UM4b: I636_19585
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Entry
I636_19585 CDS
T02723
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
amad
Alteromonas mediterranea UM4b
Brite
KEGG Orthology (KO) [BR:
amad00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
amad03016
]
I636_19585
03036 Chromosome and associated proteins [BR:
amad03036
]
I636_19585
Transfer RNA biogenesis [BR:
amad03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
I636_19585
Prokaryotic type
I636_19585
Chromosome and associated proteins [BR:
amad03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
I636_19585
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
SAM_GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
AlaDh_PNT_C
HI0933_like
DAO
Pyr_redox_3
Pyr_redox
Thi4
DUF3670
DUF3947
NAD_binding_9
Motif
Other DBs
NCBI-ProteinID:
AGQ03736
LinkDB
All DBs
Position
complement(4428727..4430628)
Genome browser
AA seq
633 aa
AA seq
DB search
MFYTEAFDVIVVGGGHAGTEAALAAARMGANTLLLTHNIETIGQMSCNPAIGGIGKGHLV
KEIDALGGAMALAIDKGGIQFRTLNSSKGPAVRATRAQADRTLYKNAIRDIVENQENLTL
FQQSVDDLIVENDRVCGVVTQMGLKFKAKSVVLTVGTFLGGTIHIGLENYRGGRAGDPPS
IALADRLRALPFRVDRLKTGTPARLDARSLDFSVMQPQPGDSPTPVFSFMGDRAMHPTQI
PCYITHTNEKTHDIIRGGLDRSPMFTGVIEGIGPRYCPSIEDKITRFADKTSHQIFVEPE
GLNSIEVYPNGISTSLPFDVQMNLVRSIKGFENAHIVRPGYAIEYDFFDPRDLKQTLETK
FIQGLFFAGQINGTTGYEEAGAQGLVAGANAALQVQQKDPFILRRDQAYMGVLIDDLATM
GTKEPYRMFTSRAEYRLLLREDNADSRLTAMGREIGLVDDARWAKYNDKMEAVETELQRL
RGQWIHPDHAATPELNTMLKNPVSREHSLEELIRRPEMTYSQLMKIESVGPGIDDPIAAE
QVEIQIKYAGYIARQMDEIAKTQRHENTLLPIDMDFSKISGLSNEVVAKLTEARPETIGK
ASRISGITPAAISLLLVYLKKHGMLRKQDKISA
NT seq
1902 nt
NT seq
+upstream
nt +downstream
nt
atgttttatactgaagcatttgatgtcatcgttgtaggtggtggacatgcgggtacagag
gcagcgcttgcagctgcacgcatgggtgcaaatacacttttgctaactcacaatattgaa
acgattggccaaatgtcatgtaacccagctatcggtgggatcggcaaaggtcatttggtt
aaagagatcgatgcattaggtggcgcaatggcgctagctatcgataaaggcggtattcag
tttagaacactaaactcttcaaaaggacctgctgttcgcgctacacgtgcacaagcagat
aggactttgtacaaaaatgccattcgtgacattgtagaaaatcaagaaaacctaacgtta
ttccagcaaagtgtcgacgatctcattgtagaaaacgatcgcgtatgcggtgtggttacc
caaatgggcttgaagtttaaagccaagtctgtggtattaaccgtgggtacgttccttggc
gggaccatacacatcggccttgaaaattatcgcggtggtcgtgcgggcgatccaccgtct
attgcgcttgctgatagactacgtgcccttccgtttcgtgttgaccgattaaaaaccggg
acaccagcaagactggatgcacgctctttagatttttctgtaatgcagcctcagcctggt
gacagtccaacaccggtattctcgtttatgggtgatagagccatgcaccctacacagatc
ccgtgttacattacccacactaacgaaaagacccacgatattattcgcggcggcctagat
cgctctccaatgtttaccggcgtgatcgaggggattggcccgcgctattgcccgagtatc
gaagataagatcacccgttttgcagacaagacatcgcatcaaatttttgttgagccagaa
ggcttaaacagcattgaagtttatccgaacggaatttcaaccagtctaccatttgacgta
cagatgaaccttgtccgctcgatcaaagggtttgaaaacgcacatatcgttcgtccgggt
tatgccattgaatatgatttctttgatccgcgtgatttgaaacagaccctggaaaccaaa
tttattcaaggtctcttctttgctgggcaaattaacggtaccactggctatgaagaagcc
ggtgcacaaggactagtggctggcgcgaacgctgcacttcaagtgcaacaaaaagacccg
tttatcttacgtcgcgatcaggcttatatgggcgtactgattgacgacttagcgacaatg
ggaaccaaagaaccctatcgtatgtttacgagccgcgcagaataccgactgctacttcgc
gaagataacgccgacagccgtttaactgcgatgggtcgagaaatcggtcttgttgatgat
gcgcgttgggcgaagtacaacgataaaatggaagcggtagaaacagagcttcagcgttta
cgtggtcagtggatccatcctgatcacgcagcaacgcctgaactcaataccatgctgaaa
aatccggtaagccgtgaacattcgctggaagaattgattcgacgccctgaaatgacctac
agccaattaatgaaaattgaaagcgtgggcccgggcattgacgatcccattgccgccgag
caggtagaaattcaaattaagtacgccggttatattgcccgccaaatggacgaaatcgcg
aaaacccaacggcatgagaatacgttgctaccgattgatatggacttcagcaaaatttct
ggcttgtcaaatgaggtggtagctaaacttacggaagcgcgtccagaaactatcggcaaa
gcatctcgtatttctggcattacgcctgcggccatctcgttattgctggtttaccttaaa
aagcacggcatgttgcgtaaacaagacaaaattagcgcgtaa
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