Alteromonas mediterranea U7: I876_03035
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Entry
I876_03035 CDS
T02721
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
amae
Alteromonas mediterranea U7
Pathway
amae00071
Fatty acid degradation
amae00280
Valine, leucine and isoleucine degradation
amae00310
Lysine degradation
amae00362
Benzoate degradation
amae00380
Tryptophan metabolism
amae00410
beta-Alanine metabolism
amae00640
Propanoate metabolism
amae00650
Butanoate metabolism
amae00907
Pinene, camphor and geraniol degradation
amae00930
Caprolactam degradation
amae01100
Metabolic pathways
amae01110
Biosynthesis of secondary metabolites
amae01120
Microbial metabolism in diverse environments
amae01200
Carbon metabolism
amae01212
Fatty acid metabolism
Module
amae_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
I876_03035 (fadB)
00650 Butanoate metabolism
I876_03035 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
I876_03035 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
I876_03035 (fadB)
00310 Lysine degradation
I876_03035 (fadB)
00380 Tryptophan metabolism
I876_03035 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
I876_03035 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
I876_03035 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
I876_03035 (fadB)
00930 Caprolactam degradation
I876_03035 (fadB)
Enzymes [BR:
amae01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
I876_03035 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
I876_03035 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
I876_03035 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
I876_03035 (fadB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
5_3_exonuc_N
Motif
Other DBs
NCBI-ProteinID:
AGP88492
LinkDB
All DBs
Position
complement(709165..711315)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYTGKSLSVSLLDDGFAELVFDAEGSVNKFDRQTVSELDEATQALLAKGDVKGLVVRSA
KPAFIVGADITEFTGLFTMDDAEVLQWVANTSQVFDRFEDLPFPTIAAVNGFALGGGCEM
ALACDMRIADTTASIGLPEVKLGLMPGFGGTVRLPRLIGADNALEWMTTGRDRKGAKALA
EGAVDAVVAPEALVEGALSMVKDAAEGKFDWQARRAVKKAPLQLNKNEAMMSFSTAQAMV
FAQAGKHYPAPHKMVETVQKAAGLDRDGALKLENEGFVALAKTDAAKAQIGIFLADQLVK
SKGKKQAKAATKQSKLNAVLGAGIMGGGIAYQSAVKGTPVIMKDINQGALDLGLSEAAKI
LGKGMKRGKVDATKMAQTLNAITPTLEYSTLKDADLVIEAVVENPKVKGIVLKEVEDNVA
DDAIITSNTSTISINQLAKSLDKPERFCGMHFFNPVHRMPLVEIIRGEKTSEETINAVVA
ATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVDKVMEKIFGWPMGPAY
LMDVVGIDTGDHAADVMAAGIPERMARLDNDPVTLFYKEERLGQKNGKGFYNYGVDKRGK
PKKTPAEEAYALMAPHVAEKTDFEADDIIARLMIPMANEAIRCLEEGIVDSAAEADMALL
YGLGFPPFRGGIFRWIETIGLANFVAMADKYAELGPIYQISDGVREMAASGKSYFA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatatacacaggcaaaagtctttccgtcagcctgttagatgacggctttgctgagctg
gtattcgacgccgaaggttcagtaaacaagttcgaccgccaaacagtgagcgaacttgac
gaagcaacccaagccctacttgctaaaggcgatgtaaaaggcttagtagtacgcagtgca
aaacctgcatttatcgtaggtgcagatatcaccgagttcactggtcttttcactatggac
gatgctgaagtactacagtgggttgccaatacgtcacaagtattcgaccgcttcgaagac
ctacctttccctaccattgctgctgttaatggctttgcgctaggtggtggttgtgagatg
gcattggcgtgtgacatgcgtattgcagacacaacagcttcaatcggtttaccagaagtt
aagctaggccttatgcctggttttggtggcacggttcgccttcctcgcttaataggtgca
gataacgcccttgagtggatgactactggccgtgacagaaaaggcgcgaaagcccttgct
gaaggcgcggttgatgccgttgttgctccagaagcacttgttgaaggcgcactttcaatg
gtgaaagacgctgcagagggcaagtttgactggcaagctcgtcgtgcggttaagaaagcc
ccactacagctaaacaaaaacgaagctatgatgagcttcagtactgctcaagccatggta
ttcgcgcaagctggtaagcattacccagctccgcacaaaatggttgagacggtacaaaaa
gcagcgggcctagaccgtgacggtgcacttaagcttgaaaacgaaggctttgtggccctt
gcgaaaaccgacgcagcgaaagcacaaatcggcattttccttgccgaccagctagttaag
agcaaaggcaagaagcaagcaaaagcagccactaagcagtctaagcttaacgctgttcta
ggtgcaggcatcatgggcggcggtattgcataccaaagcgcagtgaaaggcacaccggta
attatgaaagacattaatcaaggtgcactagaccttggtctttcagaagcggccaaaatt
cttggtaaaggtatgaagcgcggtaaagttgatgcgactaaaatggcgcaaacgcttaac
gcaattacacctacccttgagtacagcacgcttaaagatgcagaccttgttattgaagcg
gttgtagaaaacccgaaagtaaaaggtattgtacttaaagaagtagaagacaatgtagcg
gacgacgctatcatcacttcaaacacttctactatctctatcaatcagctagctaaaagc
ttagacaagccagagcgcttctgtggtatgcacttcttcaacccagtgcaccgcatgccg
cttgttgaaattattcgtggcgaaaaaacgtcagaagaaaccatcaatgcagtagtagcc
gctacccttaaaatgggcaaaacccctattgtggttaatgactgcccagggttcttggta
aaccgcgtattgttcccatactttgcgggcttcagtaagctacttatcgacggcgctgac
tttgttgctgttgataaagtaatggaaaaaatcttcggctggccaatgggcccggcttac
ctaatggacgttgtaggtatcgacacaggcgatcatgcagcagacgtaatggcagcaggt
attccagagcgtatggctcgcctagacaacgacccagtaaccctgttctacaaagaagag
cgtttaggtcagaaaaacggtaaaggtttctacaactacggtgttgataagcgcggtaag
cctaagaaaacacctgctgaagaagcatatgcactaatggcgccccacgtagctgagaag
acagactttgaagctgacgacattattgcacgccttatgatccctatggcaaacgaagca
attcgctgcctagaagaaggcattgtagatagcgcagctgaagcagacatggcgctactt
tacggcttaggtttccctccattccgcggtggtattttccgttggattgaaaccattggc
ttggcgaactttgttgctatggcagacaagtacgctgaacttggtccaatttatcagatt
tcagatggcgttcgtgaaatggccgcttctggtaaatcctatttcgcataa
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