Alteromonas mediterranea U7: I876_03080
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Entry
I876_03080 CDS
T02721
Name
(GenBank) sigma S (sigma 38) factor of RNA polymerase, major sigma factor during stationary phase
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
amae
Alteromonas mediterranea U7
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amae03021
]
I876_03080
Transcription machinery [BR:
amae03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
I876_03080
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Motif
Other DBs
NCBI-ProteinID:
AGP88501
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Position
complement(721130..722122)
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AA seq
330 aa
AA seq
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MGKSNKALESKSQDDLEVIDMPADMKADEALTNDAELENDDAIFSQDDQPKNLDATQLYL
GEIGFSPLLTAEEEVYFARRSLKGCEASRKRMIVSNLRLVVKIARRYNNRGLALLDLIEE
GNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNVYLRAS
RELSQKLDHEPTAEEIAAALDKPVEDVTKMLRLNERITSVDTPIGGENDKALLDIIADEK
EFSPEESLQDSDIKSNIITWLEELNPKQREVLARRFGLMGYEPSTLEDVGAEIGLTRERV
RQIQVEALRRLRDMLGHQGLSLENLFDQMK
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagtcaaataaagccttagaatcaaaatctcaagatgacttagaagtcatcgac
atgccagctgatatgaaagctgacgaagccttgaccaacgacgctgaactagaaaatgac
gacgccattttcagtcaggacgaccaacctaaaaacctagatgcaacacagctttatcta
ggcgagattggattttcaccactgctaaccgcagaagaagaagtttattttgcgcgccgc
tcactgaaaggctgcgaggcctctcgtaagcgtatgattgtaagtaacctgcgcctagtc
gttaagattgcacgccgttacaataatcgtgggttggcacttcttgatttaattgaagaa
ggtaatttagggcttattcgcgctgtcgaaaagttcgaccctgaacgcgggttccgcttt
tccacatacgccacgtggtggattcgacaaaccatcgaacgcgccatcatgaatcaaacg
cgtactatccgtttgcccattcatgtggttaaagaactcaatgtttatttacgcgcttca
cgtgaactttctcaaaagttagatcatgagcctactgcagaagaaattgcagcggcacta
gacaagcctgtagaagatgtcacaaagatgcttcgactaaacgaacgcattacctctgtt
gatacgcctattggcggagaaaatgacaaagctttgctcgacattattgctgatgaaaaa
gagttcagccctgaagagagccttcaagactcagacatcaaaagtaatattattacctgg
cttgaagaacttaaccctaaacaacgcgaagtactcgcacgccgttttgggcttatggga
tacgagccatctacgttggaagatgttggtgcagaaattggcctaacacgtgagcgtgtt
cgtcagattcaagtagaagcactacgccgtcttcgcgatatgctgggccatcaggggctt
tcattagagaatctgttcgaccaaatgaagtag
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