Alteromonas mediterranea U7: I876_03165
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Entry
I876_03165 CDS
T02721
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
amae
Alteromonas mediterranea U7
Pathway
amae03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
I876_03165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
amae03019
]
I876_03165
Messenger RNA biogenesis [BR:
amae03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
I876_03165
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Nudt16-like
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
AGP88518
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All DBs
Position
739884..740426
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AA seq
180 aa
AA seq
DB search
MIDADGFRANVGIVICNKMGQVFWARRYGQHSWQFPQGGIDEGESAEQAMYRELHEEVGL
TPKDVTILSVTRNWLRYKLPKRLIRQGSNPVCIGQKQKWFLLQLDCNERDVNVLKTGHPE
FDDWRWVSYWYPIRNVVSFKRDVYRRVMKEFSPVVMSAQQRPLQRQNAAPHKRGKKRRRG
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
gtgatagatgccgatggattccgtgcgaatgtgggcatagtgatttgcaacaaaatgggt
caagtattttgggcaagacgttatggtcaacattcatggcagttccctcaaggcggaatt
gatgaaggggaatctgctgaacaagctatgtaccgggagcttcacgaagaagtggggctg
acaccgaaagatgtcaccattttaagtgttacccgtaactggcttagatataagctgcca
aagcgattaattcgacaaggtagtaaccctgtttgtatagggcaaaaacaaaaatggttc
ttgttgcagctagattgcaacgagcgcgatgttaatgtgcttaagacaggtcatcctgaa
tttgatgactggaggtgggtaagttactggtatcctattaggaacgttgtatcgtttaag
cgggatgtttacaggcgggtaatgaaggagttttcacctgttgttatgtctgcccagcag
cgccctttgcagcgtcaaaacgcagcgccacacaagcgtggaaaaaagcgcaggcgtggc
taa
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