Alteromonas mediterranea U7: I876_03220
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Entry
I876_03220 CDS
T02721
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
amae
Alteromonas mediterranea U7
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amae03021
]
I876_03220
Transcription machinery [BR:
amae03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
I876_03220
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_1_RapA
Tudor_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGP88529
LinkDB
All DBs
Position
complement(751277..754120)
Genome browser
AA seq
947 aa
AA seq
DB search
MSSDSQFSVGQRWLSNTETELGLGVIMGTDFRSVEVLYPATGEARKYTKQDAPLTRLIFE
IGETVKSQDGWEMTITEKEESQGVCIYHGLSEDTKAQVRLPETMLDSHIQLNQPERRLFS
QQLDNPKWFDLRERALDYQYDYLRSSTIGLAGARISLIPHQLHIASEVGGRHAPRVLLAD
EVGLGKTIEAALIIHQQLKTGRAERVLILVPDSLVHQWLVEMLRRVNLPFAIYDESRCDA
IEESEASDAGEVNPFENDQLVLCSIDFLSQSEKRQKQVQAASWDLMVVDEAHHLAWSSEA
PSAEYKCVEALANLTPGVLLLTATPDQLGHESHFARLRLLDPARFHSYNAFLEEESKYSQ
LADAVAPLLSDAEPNDKQRTKLAEFAPDVMEHTGDLSTPENRHALLHQLIDCHGTGRMLF
RNRRANIEGFPERKLSAYELALPEVYADAVSGGDLTYSLYPERMANVVNSWTKHDPRVEW
LLDFMQSVKPEKILLICASARTAQELGEVIRTQSGIRHSVFHEGMSIVERDKAAHYFADE
EEGAQILLCSEIGSEGRNFQFAHHLVLFDLPITPDLLEQRIGRLDRIGQTQTVQIHVPYL
AKTAQHVLLDWYHEGLNAFEKTCPTGSGVFDDVKPLLVGACLHPDDISARDELINMSVTL
NSQLVAQLEAGRDRLLELNASGEGRVEQLLEDIVTLDSEQDLSRFMGRVFDAIGVQQEEK
GNDCFILMPTESMVSQLPGLDPEGMTVTYKRRVATTLENVQFLSWDHPLVHTAIDVILTD
VHGKSSMGFIAEPSLPKGAYWIEALFVLHAQAPKALQLSRFLPQTPVRVCLDAQGNASDL
SFDVKRKIGRKISAQLLKALQQPLELAIEKARKLAHQQANQKQHDALNTMHLTLGEEIQR
LRDLQKRNPAVRDSEIEFIETQMNALDKVIQEADVQLDALRIVVNNP
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagatagtcaattttcagttggtcaacgttggttaagcaacacggaaacagag
ctaggtttaggtgtgattatgggcaccgatttccgttcagttgaagtattgtaccccgca
actggcgaagcacgtaaatataccaaacaagacgctccactaacgcgactcatctttgaa
ataggcgaaacagtaaaaagccaagatggttgggaaatgaccattacagaaaaagaagaa
agccaaggggtgtgtatttatcacgggcttagcgaagacaccaaagcgcaagtgcgtttg
cccgagacgatgctagacagccatattcaactaaaccaacctgaaagacgtttgttcagc
cagcagctcgacaacccaaagtggttcgatttacgagagcgtgctttagactatcaatac
gactaccttcgctctagcactatcggcctagctggcgcgcgtatttctcttattcctcat
cagcttcacattgcttcagaagtcggcggtagacacgcgccgcgcgtactccttgccgat
gaagtagggttaggtaaaaccattgaagctgcgctaattatccatcagcagcttaaaacg
ggccgcgctgaacgcgtgcttattttggtgcctgactcattagtccaccaatggctggta
gagatgcttcgtagagtaaacctaccctttgccatttacgatgaaagtcgttgcgacgcg
atagaagaaagcgaagcgtctgatgctggcgaagtgaatccgtttgaaaacgatcagcta
gtactttgtagcatcgactttttaagccaaagtgaaaagcgccaaaagcaagttcaagcc
gcaagctgggatttgatggttgtggatgaagctcatcacctggcgtggtcaagcgaggcg
ccatcagctgagtataagtgcgttgaagctttagctaacctaacgcctggtgtattgctg
cttactgcaaccccagatcagcttggtcacgaaagtcactttgctcgcctgcgtcttctt
gaccctgctcgttttcatagttacaacgcttttttagaagaagagtcgaaatatagccag
ctggccgacgccgtcgcgccactgctttcagatgcagagcctaacgacaaacaacgtacc
aaattggcagagttcgcccctgatgtcatggagcacaccggcgatttgagcacgccagaa
aaccgccatgcgctgttacaccagttaattgactgtcacggcactggccgcatgctgttt
agaaaccgtcgcgctaatattgaaggctttcctgaacgtaaactgagcgcttatgaactt
gcgttgcctgaagtctacgcagatgcggtaagcggcggcgacctgacctactcgctttac
cccgagcgaatggccaacgtggtaaatagctggactaaacacgaccctcgtgttgaatgg
ctgcttgacttcatgcagagcgttaagcctgaaaaaatactgcttatttgtgccagtgct
cgcactgcgcaagagctaggtgaagtcattcgcactcaatcaggcattcgacacagcgta
ttccacgaaggtatgagcattgtagagcgcgacaaggctgctcactactttgccgacgag
gaagaaggtgcacaaattctactgtgtagcgaaattggcagtgaaggccgtaacttccag
tttgcccaccatttggtgttgttcgatttacccattacacctgatttactggaacagcgc
attggtcgactcgatcgaattggccaaacgcaaacagtacaaattcacgtaccgtatctt
gctaagaccgcgcagcatgtgttgttagattggtaccatgaaggactaaacgcatttgag
aaaacctgcccgacaggctctggcgtattcgatgacgttaaaccgttgcttgttggtgca
tgcttacatcccgatgatataagcgctcgtgatgaacttatcaatatgagcgtaacgctg
aacagccagcttgtagcgcagttggaggccggacgagatcgcttactagagttaaatgcc
tctggtgaaggccgcgtagagcagttactcgaagacattgttacccttgatagcgaacaa
gatctatcgcgcttcatgggccgcgtgttcgacgctatcggtgtacagcaagaagagaaa
ggcaacgactgctttattcttatgcctaccgagtctatggtgagtcagcttcctggcctt
gaccctgagggaatgacagtcacctacaagcgccgtgtggcaacaaccttagagaacgtg
cagtttcttagctgggaccaccctcttgttcataccgccattgacgttatccttacggat
gttcacggcaagagtagcatgggctttattgctgagccgtcgctgccaaaaggcgcatac
tggatagaggcgttatttgttcttcatgctcaagcgccaaaagcgctgcagcttagccgt
ttcttaccgcagacgccggtacgcgtatgcttagatgcacaaggaaatgcgtctgactta
agcttcgatgtgaaacgtaagattggacgtaaaatttcagcgcagctattgaaagccctg
caacagccacttgagttggctattgagaaggcgcgtaagcttgcccaccagcaggccaat
caaaagcagcacgacgcgttgaataccatgcacttgaccttgggcgaagaaattcaacgt
ttacgcgacttacaaaagcgcaatccagcggtgcgagacagtgaaattgagttcattgaa
acgcaaatgaatgccctcgataaggtaattcaggaagctgatgttcagctagatgcgttg
cgaattgtggtaaacaatccgtaa
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