Alteromonas mediterranea U7: I876_04310
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Entry
I876_04310 CDS
T02721
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
amae
Alteromonas mediterranea U7
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amae03400
]
I876_04310
DNA repair and recombination proteins [BR:
amae03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
I876_04310
Archaeal homologous recombinant proteins
I876_04310
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
PE-PPE
THEG4
Motif
Other DBs
NCBI-ProteinID:
AGP88745
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Position
1009604..1011151
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AA seq
515 aa
AA seq
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MAKAALRRMRFSISNATSLVHFYMKILHTSDWHLGQSFFTKSRKKEHAAFLKWLLQQVEA
HQIDAIIVAGDVFDTGTPPSYARELYHAFIGELQGMQCTLVVLGGNHDSVSVLNESKALL
KYLNSHVIASTYGEISEQVIALKNRKGQPSAVLCAVPFIRPRDVLVSESGQSATDKRQAL
GNAIKQHYASLYSEALTLRNTLGNNRFEEGIDHSTAIPIIATGHLTALGVSQSESVRDIY
IGTLEGFDAKGFPPADYIALGHIHRPQKVAKTEHIRYSGSPIPLSFDELTSQKQIVLVEF
DGVSTTPNISTLPVPRFQAMEVIKGDLKAIEAMINESEAIAYASLANEDQNASSEPLASH
EASSSNEKPFGSKDPVWLCIEVETEDYLTDLQQRIQGLLEGKNAEILQLKRMRKRTLKSL
SKKQNVQLSELSVNEVFEARLVLESLDEEPNETSNEASELPQKNTEPSRIKRIKHLFAEA
VALVHTNKEDLENSEGLVQSKPASESEPNKETQGD
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaagccgcattgcgccgaatgcgtttctctatctccaatgcaacaagcctggtt
cacttctacatgaaaatattgcatacatctgactggcatttaggtcagagtttttttacg
aaaagtcgcaaaaaagaacatgccgctttccttaaatggcttctccaacaagtagaagcg
catcaaatagatgcgattattgtcgcgggcgatgtgtttgacactggcacgccgccaagc
tatgcccgagagctataccatgcgtttatcggtgaattacaaggcatgcagtgtacgcta
gtggtgctggggggaaatcacgactcggtgtcggtactaaatgaaagcaaggcgctactg
aaatatttaaatagtcatgtgatagccagtacatatggagaaataagtgaacaggtgatt
gcgcttaaaaaccgcaagggtcagcccagtgccgtgctttgtgctgtgccatttattcgc
cctcgtgatgtattggtaagtgagtcagggcaaagcgcaactgacaagcgccaagcgctg
ggcaatgcaataaaacagcactatgcgtcgctttatagtgaagccctaacactacgcaat
acattgggaaataatcgatttgaagagggcattgatcatagcactgctattcccattatc
gccacggggcatttaaccgccttgggtgtaagtcagtctgaaagtgtgcgtgatatctac
attggcacccttgaaggctttgacgccaaaggttttccgcctgccgactatatcgcatta
ggccacatccatagaccccaaaaggtagcgaaaaccgaacacattcgctattcaggctcg
cctataccgctaagctttgatgaattaacttctcaaaaacaaatcgtgctggtggagttt
gacggggtaagcacgacacccaatatctcaacccttccagtacctcgttttcaagccatg
gaagtaataaaaggggacttaaaagcgattgaggcgatgattaatgaaagcgaagccata
gcctatgcttccctagcaaacgaagaccaaaacgccagttcagaacctctcgctagccat
gaagcttctagttctaacgaaaaaccttttggctcaaaagaccccgtgtggttgtgtatt
gaggttgaaaccgaagactatctgactgatttacagcagcgaattcagggcttattagaa
ggtaaaaacgctgaaattcttcagctaaaacgcatgcgtaagcgcacgttgaaaagcctg
agcaaaaagcaaaatgtacagcttagcgagctgtcagtgaacgaggtttttgaagcgcgc
ttagtgctagagtcgttggatgaggaacctaatgaaacgtccaacgaggcttcagaactg
ccgcagaaaaatactgagccgtcacgtattaagcgtattaaacatttgtttgccgaagcc
gtagcgctagtgcataccaataaagaagacttagaaaacagcgaagggctagtacaatca
aagcctgcaagcgaatctgaaccaaacaaagaaacgcagggcgattga
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