Alteromonas mediterranea U7: I876_10040
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Entry
I876_10040 CDS
T02721
Name
(GenBank) transcriptional regulator
KO
K17737
LysR family transcriptional regulator, carnitine catabolism transcriptional activator
Organism
amae
Alteromonas mediterranea U7
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amae03000
]
I876_10040
Transcription factors [BR:
amae03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I876_10040
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
MarR_2
Motif
Other DBs
NCBI-ProteinID:
AGP89869
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Position
2277213..2278097
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AA seq
294 aa
AA seq
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MDVSYRQVKAFVEVAKSSTFAEAAVNLHLTQPALSSAIKKMEEQLGGKLFKRNTRNVSLT
PEGEVLFPNALRLLHDWDNTFSDIQNLFAMAKGQLTICAMPSFAESHLPSILSAFHKRTP
NVNLRIVDVVMEQVIHEVTTGRSEIGFSFEPERKDGLVFKSLFADQFVVVANSSQAKYLS
NAPSWQDCLLHPLVMMNRGSAVRHWTQSQLARFGELNIIAETGQLSTLGKLIQNGLGISI
MPAICQSQMEGLGLVVRQITINPLIKNIGIIKHARKGLSLPAQSMWDLAIAHYA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
gtggacgtatcctaccgacaagtgaaagcgtttgtagaagtggcgaaatcttcgacattt
gctgaagctgcagttaatttacaccttactcagccagcactgtcttctgccattaagaaa
atggaagagcaattgggcggcaaactctttaagcgtaatacgcgtaatgtaagcctgaca
ccggaaggtgaagtgttattcccaaatgccttacgactgcttcacgattgggataacacg
ttttcagacatacagaacttgtttgccatggccaaaggtcagctgaccatttgcgcaatg
ccctcatttgcagagtcacatttacccagtattctatctgcttttcacaagagaacgcca
aacgtcaacttgcgtatcgtcgatgtagtgatggagcaagttattcacgaagtcactaca
ggtcgaagtgaaatagggttttccttcgagccagagcgaaaagatgggctagtgtttaaa
agtctgtttgctgaccagtttgttgtagtggctaattcttctcaggccaagtatttaagc
aacgcgccaagctggcaagactgcttgctgcaccctctggtaatgatgaacagaggctcc
gcggttcggcattggacacaatctcaattagcgcgttttggtgaattgaacattattgcc
gaaacgggtcagctatcaacgcttggcaaattaattcaaaatgggttgggcatttcaatt
atgccggctatttgccaatctcaaatggaggggttagggctggtagtgagacaaataaca
atcaacccgttgataaaaaatatcggtattataaagcatgcgcgaaagggtttgtcgcta
cctgctcaatctatgtgggacttagctatcgcgcattacgcttaa
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