Alteromonas mediterranea U7: I876_12780
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Entry
I876_12780 CDS
T02721
Name
(GenBank) DNA polymerase III subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
amae
Alteromonas mediterranea U7
Pathway
amae03030
DNA replication
amae03430
Mismatch repair
amae03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I876_12780
03430 Mismatch repair
I876_12780
03440 Homologous recombination
I876_12780
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amae03032
]
I876_12780
03400 DNA repair and recombination proteins [BR:
amae03400
]
I876_12780
Enzymes [BR:
amae01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I876_12780
DNA replication proteins [BR:
amae03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I876_12780
DNA repair and recombination proteins [BR:
amae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I876_12780
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_14
AAA_22
RuvB_N
AAA_16
AAA_2
AAA_18
AAA_5
Rad17
ResIII
AAA_19
AAA_30
DNA_pol3_delta
AAA_7
nSTAND3
AAA_24
PIF1
Motif
Other DBs
NCBI-ProteinID:
AGP90403
LinkDB
All DBs
Position
complement(2897072..2899876)
Genome browser
AA seq
934 aa
AA seq
DB search
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGANPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKAMSR
EQIVGQLTHILQQEQLAFEAPALALLARAAQGSMRDALSLTDQAIAQGGNQVMASVVTDM
LGLMDKNQLLKVIHAVVNKSPAEVLQLVNDIAEQAPDYDNVHSELASLLHQIALTQWVPE
ACKLETTSAKAIFQLAKTISAEQVQLLYQIALQGRKDLPFAADGKSAFEMTLMRMMAFAP
NAPIAETVDEIENGRSEHNLPVNHASPSGGPGNVSKQEEPPLSETSATIDQGEAQIEAQP
EHKPTSPKTPPQSPIADASTDLPSSAPAETVANEEEPTAVSNTQTNTAAETDIAFEANLS
SASEAQEPQSNASVEDEEASPVAQYFDEPPLDAYMDDMPPLQDESGHYELDTPESERIVE
PSPSAEEQLTSTADMLALRQKLKQKKAQDADAKSSSAANAKTQSASEIQARFTRSKTDAA
STVADEKNSPEPINSPEPINSPELSNSPELSNSPELSNSPEPINSPALEAAPESEQSQDS
ITAHQSANALNDGSDTQLLGGSEQTSTNADFADNNDSGHDAFALDDFEEDMPFSNDESDA
NYNPNPQVEDAPPWDTGKSVQDGHSVEPSLTPVPRANELESKEHGFYERGENAGERSFTR
DALDFDTPLSTTYEGSLHAYLSDGSKLTHASQIDDWSNLVEQMPVAGLLKQLVLHAAFSR
NGNHVSLEIHHSQTHLLKDSAKKQLIDAIHHGLGENVEVSITLGEPLSTPFALQQEIHAM
RHAHAHSVIKTDETIQALLSTFDGSVLTDTVKAR
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtactggcaaggaagtggcgaccaggcaagttcagtgaacttgtaggt
caagagcacgtagtgtctgctatttcaaatgcgctcgataacgaccgtttacaccatgct
tatctttttacaggtacgcgtggtgttggtaaaacgaccattgctcgtattttttcaaaa
agccttaactgtgaggaagggcaaggggcaaacccttgcggtcaatgcaatacctgtaaa
gaaatagagcagggtaattacgttgacttgcttgaaattgacgcggcatcaagaaccaaa
gtggaagacactcgagagcttcttgataacgtacaatacaagccaacccgcgggcgctac
aaagtgtaccttatcgatgaggtacacatgctttctaaacatagctttaatgcgctgtta
aaaacgctagaagagccgcctccgcatgtaaagttcttgttggcgacaacagatccacaa
aaactccccatcaccattttatcgcgatgcttgcagtttaacctgaaagcgatgtcgcga
gagcaaatagtcggtcagcttactcatatacttcagcaagagcagcttgcttttgaggcg
cctgctttggctttgctggctagggcggcacagggcagtatgcgtgatgcgctgagttta
accgaccaagcaattgctcagggtgggaatcaagtaatggcgtcggttgttaccgacatg
cttggcctgatggacaaaaaccagcttttgaaagtaattcatgcggtggtgaataaaagc
cctgccgaggttttgcagttggttaacgacattgctgaacaagcacctgattatgacaat
gtgcatagtgagttggcgagcttgcttcaccaaattgcgttgacgcaatgggtgccagaa
gcctgcaagcttgaaaccacgtcggcaaaagcgatatttcaattagccaaaactatttct
gcagaacaagtacagctactttatcaaattgcattgcaaggcagaaaagatttacctttt
gctgccgatggtaaaagcgcgtttgaaatgacgctaatgcgtatgatggcctttgcacca
aacgcgccaatagctgaaaccgtagacgagatagaaaacgggaggagtgagcataattta
cctgtaaaccatgcttctcccagtggtggcccgggaaacgttagtaagcaggaggaaccg
cctttaagcgaaacttctgcaacgatagaccaaggcgaagcgcaaattgaagcgcagcca
gagcataaacctacttcacctaagacaccgccacagagtcctatagctgatgcgtcgacg
gatcttccgtcatcagctcccgctgaaaccgtagcgaacgaagaagagcccaccgcggtt
tctaatacgcaaacaaatacggccgctgaaactgatatagcgtttgaagcgaatctttcc
agtgcatctgaggcacaagagcctcagagcaatgcatcagttgaagacgaagaagcaagc
cctgttgctcaatattttgatgaaccaccgctagacgcttatatggatgacatgccacct
ctacaggatgagagtggccattacgaattggacacgcccgaaagcgagcgtatagttgag
ccatcgccgtcagcagaagaacagttaacctctaccgccgatatgctggcattgcgccaa
aaactcaaacaaaaaaaagcgcaagatgctgacgcaaaaagtagtagtgcggctaatgct
aaaacgcaaagcgctagtgaaatacaagcgcggtttactagaagtaaaacggacgctgct
agcacagtggctgatgaaaagaacagccctgagccgattaacagccctgagccgattaac
agccctgagctaagtaacagccctgagctaagtaacagccctgagctaagtaacagtcct
gaacccattaacagtccagcgcttgaagccgctccagagtccgaacaaagccaagacagt
ataactgcccatcagagtgccaatgcgcttaacgacggtagcgatacacaattacttggt
ggtagtgaacagacaagcacaaatgctgactttgcagataacaatgattccggtcatgat
gcctttgccctagatgattttgaagaggatatgcctttttcaaatgatgagagtgacgca
aattataaccctaacccgcaggtagaagatgctccgccttgggatacagggaagtcagtt
caagacgggcattcagttgagccgtcacttacgcctgttcctcgcgccaatgaactcgag
agcaaggaacacggcttttatgagcgtggtgaaaatgccggtgaacgttcatttactagg
gacgcattagattttgatacgcccttaagtacaacttatgagggtagtttacacgcttat
ctttccgatggaagtaagctgactcacgccagtcaaattgatgactggagcaacttggtt
gagcaaatgccggtagcaggcttgcttaagcagttggtattacatgcggcattttcgcga
aatggcaatcacgtgtcccttgaaattcaccatagtcagacgcatttattaaaagacagt
gctaaaaagcagttaattgatgcaattcatcacggcctgggtgaaaacgtagaagttagt
attacgttgggtgaaccgttatccacgccgtttgcattacagcaagaaattcatgccatg
cgacacgcgcatgcgcactcggttattaaaaccgatgagacgattcaagcattgctatcg
actttcgatgggtcagtgctaaccgatacggttaaagcgcgatag
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