Alteromonas mediterranea U7: I876_13330
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Entry
I876_13330 CDS
T02721
Name
(GenBank) exonuclease VII, large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
amae
Alteromonas mediterranea U7
Pathway
amae03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
I876_13330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amae03400
]
I876_13330
Enzymes [BR:
amae01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
I876_13330
DNA repair and recombination proteins [BR:
amae03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
I876_13330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGP90513
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All DBs
Position
3026413..3027777
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AA seq
454 aa
AA seq
DB search
MIFFMFTNSPSTSRQILTVTKLNRLARTVLEGEIGLIWLSAEISNFVAAASGHWYFTLKD
NKAQVRAAMFKGANRNVRLRPKEGDKILVRASVGLYEARGDYQLVVEHMESDGEGALKQA
FEALKFKLNNEGLFDATNKRPLPERINRIGVITSSSGAALHDVLSVLKRRSPQTEVIVYP
SMVQGEAAPLQLINALRKANQRSEVDVLLLTRGGGSLEDLWCFNDESLAREIAASTLPIV
SAVGHEVDFTISDFVADVRSPTPSAAAEILSQDSTALYQTINQQKQRLARAMNHCIQANK
QQLTLKKQRLDALHPQSRIQSQWQTLDRLQLRLVHAMQRDMSTAEKRVHALNYRLNQQSP
AARVARAKDKLSYANAKLIATMTALLKNKKSELGGSVTLLQSVSPLSTLARGYSITLTDS
TTVNNVSKVNVGDEIKTRVTDGEITSTVTNIQRQ
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
gtgattttttttatgtttacaaattcgccatctacctctcgacaaattttaacagttact
aagctaaatcgcctcgccagaaccgtactagagggcgaaattggtcttatttggctatct
gcagaaatatcaaactttgtggccgccgcttcagggcattggtacttcaccctgaaagac
aataaagcgcaagttcgcgccgccatgtttaaaggcgctaatcgcaatgtacgccttcgc
ccaaaagaaggcgataaaattttagtgcgcgcttcggtaggactatatgaagcccgcggt
gactatcaacttgttgttgagcacatggaaagcgacggtgaaggtgcgcttaagcaagcg
tttgaagcattaaaattcaagcttaataatgaagggctatttgatgcaacgaataagcgg
ccactgcctgaacgtataaatcgcattggagtgatcacttcatcaagcggcgcagcgctt
cacgatgtcttaagcgtattgaaacgcagaagcccgcaaactgaggttattgtttaccca
tctatggtacagggtgaagccgcaccgcttcagctaattaatgcgctgcgtaaagctaac
caacgttcagaggtcgacgtgcttctactcaccagaggcggaggctcgctggaagattta
tggtgctttaacgatgaaagcttggccagagaaatagccgccagcacccttcccatcgtg
agcgccgttggccacgaagtagactttaccattagcgactttgtggctgatgtacgctct
cccaccccatctgctgcggcagaaattttaagtcaagactctacagcgctctatcaaacc
ataaaccagcagaagcagcgtttggcccgcgcgatgaaccattgtattcaggcgaataag
caacaactgacccttaaaaagcagcgcttagatgctctgcacccgcaaagtcgtatacag
tctcagtggcaaaccttagacaggttacagctgcgcttagtacacgcaatgcaaagggat
atgtccactgcggaaaagcgcgttcatgcgcttaactaccgattaaatcaacaatcgcct
gcggcgcgtgtagcccgagcgaaagacaaacttagttacgcaaacgctaagttgatcgct
actatgactgccttgctcaaaaacaagaaaagtgaactcggtggttccgtaacactctta
caatctgtaagcccgctctctacgttggctcgaggctacagcattacccttactgatagc
actacggttaataacgttagcaaggttaatgtaggcgatgagataaaaacacgagtgact
gatggcgaaataaccagtacagtgacaaatattcaacggcaatag
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