Alteromonas mediterranea U7: I876_14340
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Entry
I876_14340 CDS
T02721
Name
(GenBank) PKD domain-containing protein
Organism
amae
Alteromonas mediterranea U7
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
K319L-like_PKD
PKD_4
PKD
REJ
Big_9
Sde0182_C
DUF5980
PKD_2
DUF3124
PKD_5
Motif
Other DBs
NCBI-ProteinID:
AGP90715
LinkDB
All DBs
Position
complement(3256051..3259719)
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AA seq
1222 aa
AA seq
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MTVKKQLSLVFYVCVTCIMLTACGGGSEQSGDQLLNSAGELTAAEEATRDSKVFAVISNE
DVISDPGETIVLDGQESYDELPTDNITLEWSLKSAPANSQFEFDFGNNGNITLIAETIGV
YVIELTASDGFNSDTDTVNVTIVEPVPVAVLPEAFSLPVESTAMVSGDESYDSIDEELLF
QWSVLSPNGEEIAFETVESNDGITFELTQVGEYGVSLSVTDKDEHVSATVHTSVMSTNES
PVAEAGDDREVPYRTDVELDASLSTDIDSESLSFTWVIIDQPAGAGASVTYASDNALATF
FPTIPGDYELELTVSDGYATTTDTLTITAINTLPNIEVEESLTIQSGDNANIFAQASDAE
TSALVYSWQVLSQPNGEPISLNGNTATLNVVLHTGGEYTFEVAVSDDYDTVTETVTVTVN
NNLPISIIDIANNDLVSVIGDIVRFSASDSYDPDVGDMIEQYEWAIERKPSDSVLSLDDS
QSPEISITPDTTGLYTLSLTTFDGGNYSEKTTVDIEVISNNSLPQAQASYVIENYTTVIL
DATESSDDDNHEFSVAWSVIAKPDNAPTRILDRSAKTTKLFVQENGTYAVRLIVSDGRNN
SNPYDMVIVIDKPNEQPVADAGSPQNVGVNTKVKLDGSGSYDRDEDPVSFSWFLTSPDNS
SATLVDSDTVAPNFTPDVFGTYTLTLTVNDGELISEPSTVDIQVGNKLAPIADAGPDQNV
KTGSRVSLTAAASVDADSEITEYQWEVITVPENSTVVLDNDFDIETSFTPDLEGAYIFAL
TVKDEETWSEKSFVTVIASTGNSAPTADAGNDVTVVQGEVNIVNLIGGNSTDADGNPLSY
SWSLISRPTLSEAQIVNPKNEDATLSLDRYGSYVAQLIVFDGTVSSLPSTKHIEYVRNTT
SVYAGPDQTTFLRQRVILDGRSSGYIAFRDPETYEYEWKFIYTPSEENPPISEYVKAEDE
LEEDVLGLYEFYPDTVGTYLLRLRFRNTVTGTVSDIDTITINVKPYNTLPTADAGDDITG
SIGDLIVLDGSTSSDSEGDTLQYNWSFLQRPENSLSQINNPTSVSPFFEIDRIGDYLVRL
EVFDGSASSDPDVVKITSVEPSVGLSIQTEDGFRRLTLPYEKNETRDVSRDSDESELLLE
TLRITTVEQQVTITDVRAYDANGLVTAYMTTADNTLVPKNGSVNIELRTEYPQPGRQANL
LFEFTIKETKETVSLNYLLNVN
NT seq
3669 nt
NT seq
+upstream
nt +downstream
nt
atgacggtaaaaaaacaactttctttggtattttacgtgtgcgtaacttgcataatgctt
acggcatgcggaggtggtagtgagcaatctggtgatcaactgttaaatagtgccggtgag
ttaactgcagcagaagaggcaacacgagacagcaaagtctttgctgttatcagtaacgag
gatgttatttcagacccaggagaaactattgttttagatgggcaagaaagttatgacgaa
ctccctaccgataatattacactcgaatggtcgttgaaaagcgcaccggccaatagtcag
tttgaattcgactttggaaacaatggtaatattactttaattgctgaaacgattggcgtt
tatgttattgagctgactgctagcgatgggtttaattcggacacagatacagtgaacgtc
acaatcgttgaaccggtccctgttgcagtattacccgaagccttttcacttcctgtggaa
agtactgcgatggtatcgggcgatgaaagctatgacagcattgatgaagagttattgttt
caatggagtgtactttctcctaatggggaagaaatagcatttgaaaccgtagaatcaaac
gacggtattacgtttgagctgactcaagtcggtgagtatggagtatcgctgtctgttact
gataaagatgaacatgtctctgccactgtgcacaccagtgtgatgtcaactaacgaatct
cccgttgcagaagccggtgatgatcgtgaagtgccttacagaactgatgttgaacttgat
gcaagtttatcaaccgatatcgacagtgaatcactttctttcacttgggtgattattgac
cagcccgcaggcgctggcgcgtctgttacttatgcatctgacaatgctcttgctacattt
ttccctacaattccaggtgattatgaactagagctgactgtatctgatggttacgcgaca
acaacagacacccttactattacagccattaacacactacctaacatcgaagtggaagag
tcattaaccatacaaagtggtgacaacgccaacatttttgcacaagcatctgatgcagaa
accagtgctttggtttattcgtggcaagttttatcacaaccaaatggtgagccaatatca
cttaatggtaataccgctacgcttaacgttgtgctgcacacaggtggtgaatatactttt
gaagtggctgtcagtgatgattatgacaccgtcaccgaaactgttaccgtaacggtcaat
aataacctgccgatttccattatcgatatcgctaacaatgacctagtgtctgttatcggt
gatattgttaggttttctgcaagtgatagttacgaccccgatgtaggggatatgattgaa
caatacgagtgggccattgaaagaaagccgtcagatagtgttttatcacttgatgactca
cagtcccctgaaatttccatcactcctgataccacaggtctctacacgctaagtttgacc
acatttgatggcggtaattactctgaaaaaaccacagtagatattgaagttatttcgaat
aattcactaccccaagcgcaagcaagttacgtcattgaaaactatactacggttatctta
gacgccactgagtcatcagatgatgacaaccatgaatttagcgtggcatggtcagtaata
gcaaagcctgacaatgctcccaccagaatccttgatagaagtgccaaaactaccaaattg
tttgttcaggaaaatggtacttacgcagtgaggttgattgtatcggacggtagaaacaac
agtaatccatacgatatggttatcgttatagataaaccaaacgaacaaccggtggctgat
gcgggctctcctcaaaatgtaggtgtgaatactaaagttaaacttgatggtagtggaagt
tatgatcgggatgaagatcctgtttcattttcttggttcttaacgtctccagataacagc
agtgcaacgttggttgactctgacacagttgcaccgaattttacaccagacgttttcggt
acctatacgttgacactcacagttaatgacggcgaacttatatcagaaccatcaaccgtt
gatattcaagtgggcaataaattagcacctatcgcggatgccggccccgaccaaaatgtc
aaaacaggctctagggtttcccttactgccgcagcgagtgttgacgccgatagcgaaatt
acagagtatcaatgggaagtgattacagtgcctgaaaatagtactgtagtgctggataac
gactttgatattgaaacaagttttacgcctgacttggaaggagcatacattttcgcctta
accgttaaggacgaagaaacgtggagtgaaaaaagctttgtcactgtcattgcttcaacc
ggcaactcagcgcctaccgcagatgcaggtaacgatgtaaccgttgtccaaggcgaggtt
aatatcgtcaatcttatcggtggcaatagcacagatgcagacggtaaccccctatcctac
tcttggtctttaatcagtcgaccaacactgagtgaagcgcaaatcgttaatccgaaaaat
gaggacgctactcttagtcttgaccgatatggctcttacgttgcccaacttattgtgttt
gacggaacagtaagcagtctcccatcaacaaaacacattgaatatgtcagaaacaccacg
agcgtatatgcaggcccagaccagacaacgttcttacgacaacgagttattcttgatggg
cggagctcaggctacattgcgtttagagaccctgaaacgtatgaatacgaatggaaattt
atctacacaccatccgaagaaaatccaccaatctcagagtatgtaaaagcagaagatgaa
ctggaagaagatgtactcggactctatgagttttacccagatactgtaggtacctatcta
ctgagacttcgttttagaaacaccgtcacaggtacagtctctgatatcgatacaatcact
attaatgtgaaaccctacaacacattgccaaccgctgatgcgggtgacgatatcactggc
tcaattggagacctgatagtgctagatggaagtacttcatcagattctgagggtgacact
ttgcaatacaactggtctttccttcaaagacctgaaaacagtctctcacaaatcaataat
cccaccagcgtttctccgttttttgaaattgataggattggtgactaccttgtcaggtta
gaggttttcgacggttcagcatcgtcagatcccgacgtagtgaagattacttccgtagag
ccaagcgtagggctaagcattcaaaccgaggacggttttagacgtcttaccctgccttat
gagaaaaatgagacgagagacgtttctagggactctgatgagtctgaattactgctggag
acattgagaataaccactgttgaacagcaagtcaccattactgacgtgcgagcgtatgat
gctaatggtttagtgacggcgtatatgacgactgcagacaacactttagttcccaagaat
ggaagtgtgaatatcgaactaaggacagaataccctcagccaggaagacaggctaacctt
ctgttcgagtttacgataaaggaaacaaaagaaaccgtttctttgaactatctgcttaat
gtgaattaa
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