Alteromonas mediterranea U7: I876_15550
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Entry
I876_15550 CDS
T02721
Name
(GenBank) signal peptide prediction
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
amae
Alteromonas mediterranea U7
Pathway
amae02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
I876_15550
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
amae02000
]
I876_15550
Transporters [BR:
amae02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
I876_15550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_6
SBP_bac_8
TAT_signal
Motif
Other DBs
NCBI-ProteinID:
AGP90957
LinkDB
All DBs
Position
3520328..3521611
Genome browser
AA seq
427 aa
AA seq
DB search
MPEKSNSENSASPIRRTLLKGGLALGLTAGVTPFAIGKAKPTLRVMGTHVTLQETIRQRA
MEDLGINIAFEPGGSAAVLQKASMIPTSFDLYEQWSNSINVLWRARAIQPIEKKRLQYWE
EINDLSKTGKLTKNARMGAGDAPHKILNVQDDGTLGENHTDGISFLPYVHNVDSFGYDTS
NLPTELQGQKESWGWLLDSRYSGKVGIVNDPTIGLFDLALAAQAKGFMQFQDIGAMTEYE
LDDLFNLLIELTQLNHFNGFWTSVPESVEFMKSGRVAIESMFSPAVSALNGQDTPVTFAA
PKEGYRGWHGVMCLSSATNGRMKDVAYEYMNWWLSGWPGAFIARQGYYISNPQRSAKYLS
QAEWNYWYEGKVASEALKGTDGKISVKKGAQRTGGSYESRLSNVAVWNTVMPTYEYSLQK
WYEFITA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaaaatctaatagcgaaaacagcgcttctcctattcgccgaaccctattgaaa
ggcggtcttgccttaggtttaacggcaggcgttacgccatttgccatcggaaaagcgaaa
cccaccttgcgggtaatgggtacccacgtaactcttcaagagactattcgccagcgcgct
atggaagacttaggcattaacatagcgttcgaacccggaggcagtgctgccgtcctacaa
aaagcctccatgatcccaacatcatttgatttatatgagcagtggtctaatagcataaac
gtattatggcgagcccgtgccattcagccaattgaaaaaaagcgtcttcaatattgggaa
gaaattaacgatttaagtaaaaccgggaaactaaccaaaaatgcgcgcatgggcgcaggc
gatgcgcctcataaaattttaaacgttcaagatgatggcacgttaggcgaaaaccacact
gatggcataagctttctaccctacgttcacaatgtagactctttcggctacgatacgtcg
aatctccctaccgaacttcaaggtcaaaaagaaagctgggggtggttactagacagccgc
tactctggcaaagtaggcattgtaaacgacccaaccattggcttgttcgacttggcgtta
gcagcccaagctaaaggcttcatgcagtttcaagatataggagctatgactgaatacgag
ctcgatgacttatttaatctccttatcgagctaacccagttaaaccactttaatggcttt
tggacatcggtgcccgaatctgtagaatttatgaaaagtggtcgtgttgccatagaaagt
atgttctcgcccgcagtatctgcacttaacggtcaagatacccccgttacattcgcggca
ccgaaagaagggtaccgcggctggcacggcgtaatgtgtttatcctcggcaacgaatggc
agaatgaaagatgttgcatatgaatacatgaactggtggctttctggctggccaggcgcg
tttatcgccagacagggctactacatctcaaatccacagcgctctgcgaaatatttatca
caggcagagtggaactattggtacgaaggaaaggttgcctcggaagcgttaaaaggaacc
gatggcaagataagcgttaaaaagggagcacagcgaacggggggcagctatgaatcgcga
ctcagtaacgttgcggtttggaatacggttatgccaacctatgaatatagcttgcagaag
tggtacgagtttattaccgcttaa
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