Alteromonas mediterranea U7: I876_16950
Help
Entry
I876_16950 CDS
T02721
Name
(GenBank) LysR family transcriptional regulator
KO
K03717
LysR family transcriptional regulator, transcriptional activator of nhaA
Organism
amae
Alteromonas mediterranea U7
Brite
KEGG Orthology (KO) [BR:
amae00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
amae03000
]
I876_16950
Transcription factors [BR:
amae03000
]
Prokaryotic type
Helix-turn-helix
LysR family
I876_16950
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_1
LysR_substrate
HTH_30
HTH_23
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AGP91224
LinkDB
All DBs
Position
3870532..3871422
Genome browser
AA seq
296 aa
AA seq
DB search
MHHLNYHHLYYFYLVAGEGSIAKAAKLLHVTPQTVSGQLSTFENQLGYALFDRINKRLYL
NARGKVTYQYASEIFHKGNQLAEILNNSDEVNTKEFVIGITNGIPKVLFYDFVHDTMRRF
SHVKYVIKEDSFDGLLKELAINAIDFIVADRGIAPGTQISANSFFLGESSLSFFAKSPLS
EEQTFPDCLNQMPLLIQGNTSGIRQALTSWLETEQLYPKIVAEFDDTALLKLFGSEDFGV
FCAPSAISKHVEEQYGVHCIGNANTLNERYYAITGKSRADYTISEAIVESAREILA
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacctaaactaccatcatttatactatttttatctggtcgccggcgaaggcagt
attgctaaggcagccaagttacttcacgttactcctcaaacggttagcgggcaacttagt
accttcgaaaaccagcttggctatgccctattcgacagaataaacaagcggctatacctc
aacgcgagaggtaaagttacctatcagtatgccagtgaaatatttcataaaggtaatcaa
ctggctgaaatacttaacaatagcgatgaagtgaatacgaaagaattcgtaataggtatt
acaaacggtattccaaaagtacttttttacgattttgttcacgacaccatgcgtcggttt
tctcatgtgaagtatgtaattaaagaagacagcttcgatggattactgaaagagctggcc
attaacgctatcgactttattgttgcagaccgcggcatagcgccaggtacgcaaattagc
gccaatagctttttcttaggtgaaagctcgttgagcttttttgcgaaatcaccacttagt
gaagaacaaacctttcctgattgtttaaatcagatgccgttacttattcaaggcaacacg
tcggggatacgacaagcattaaccagctggcttgaaaccgaacagctttacccaaaaatt
gtggccgagttcgatgataccgccttattgaagctatttggcagcgaagactttggcgtg
ttctgcgcaccatcggctatttcgaaacacgttgaagagcaatatggtgtgcattgtatt
ggtaacgcgaatacgctcaacgaacgatactacgctattacaggtaaaagccgtgctgac
tatacgattagtgaggcgattgttgaatcggccagggagattctagcgtga
DBGET
integrated database retrieval system
