KEGG   Alteromonas mediterranea U7: I876_18100
Entry
I876_18100        CDS       T02721                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
amae  Alteromonas mediterranea U7
Pathway
amae02024  Quorum sensing
amae03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:amae00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    I876_18100
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I876_18100
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:amae03019]
    I876_18100
   03036 Chromosome and associated proteins [BR:amae03036]
    I876_18100
Messenger RNA biogenesis [BR:amae03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     I876_18100
Chromosome and associated proteins [BR:amae03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    I876_18100
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: AGP91452
LinkDB
Position
complement(4119225..4119473)
AA seq 82 aa
MAKGQSLQDPFLNALRKERIPVSIYLVNGIKLQGQVESFDQFVILLKNTVSQMVYKHAIS
TVVPARAITMPSAGDSENTKGE
NT seq 249 nt   +upstreamnt  +downstreamnt
atggctaaagggcaatctttacaagacccattcttaaacgctttgcgtaaggaacgtata
ccagtatcaatttatctggtaaacggtatcaaacttcaggggcaggttgagtcattcgac
cagttcgttattctactgaagaacacagtaagccaaatggtgtataagcacgcaatttct
actgttgttccagcacgcgctatcacaatgccaagcgcaggagattctgaaaatactaaa
ggtgaataa

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