KEGG   Alteromonas mediterranea U7: I876_19360
Entry
I876_19360        CDS       T02721                                 
Name
(GenBank) helix-turn-helix domain-containing protein
  KO
K18831  HTH-type transcriptional regulator / antitoxin HigA
Organism
amae  Alteromonas mediterranea U7
Brite
KEGG Orthology (KO) [BR:amae00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:amae03000]
    I876_19360
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:amae02048]
    I876_19360
Transcription factors [BR:amae03000]
 Prokaryotic type
  Helix-turn-helix
   Other families
    I876_19360
Prokaryotic defense system [BR:amae02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   HigB-HigA
    I876_19360
SSDB
Motif
Pfam: HTH_3
Other DBs
NCBI-ProteinID: AGP91702
LinkDB
Position
4391807..4392178
AA seq 123 aa
MDIRPIKTDADYRAALDDIENLMMAEPDTVEGEKLDILVTLVEAYEAKHFPMDLPDPVEA
IKFEMERKGLTVKDLEPMIGKSNRVYEILNHKRSLTLKMIWKLHEGLGIPAESLIKPPQV
RAS
NT seq 372 nt   +upstreamnt  +downstreamnt
atggacatcagacctattaaaacagatgccgactaccgcgcggcattagacgatatcgaa
aacctaatgatggcggagcctgataccgtcgaaggcgaaaagctggacattttggttacg
ttagttgaagcctacgaagcaaagcatttcccaatggatttgccagaccctgttgaggca
ataaagtttgagatggagcgcaaaggcttaacggttaaagatcttgaacccatgataggt
aaaagcaatcgtgtttatgaaatcctaaaccataagcggtcactcacgctaaaaatgatt
tggaaacttcatgaagggctaggtattccagcagagtcgctcatcaaaccgccgcaagtt
cgcgcgtcatag

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