Alteromonas mediterranea MED64: I533_00925
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Entry
I533_00925 CDS
T02958
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag00300
Lysine biosynthesis
amag00470
D-Amino acid metabolism
amag01100
Metabolic pathways
amag01110
Biosynthesis of secondary metabolites
amag01120
Microbial metabolism in diverse environments
amag01230
Biosynthesis of amino acids
Module
amag_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
I533_00925 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
I533_00925 (dapF)
Enzymes [BR:
amag01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
I533_00925 (dapF)
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Ortholog
Paralog
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
YNQ4_N
Motif
Other DBs
NCBI-ProteinID:
AGP80182
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All DBs
Position
complement(202816..203646)
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AA seq
276 aa
AA seq
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MQVQFSKMHGLGNDFMVIDNVTQNVFFSKEKIQQLADRNFGIGFDQLLMVEPPYDPEQDF
HYRIFNADGSEVEQCGNGARCFARFVKQKGLINRNKIVVSTKAGKMVLYLEKDGQVTVNM
GKPEFEPANIPLKANKQENTYILRVGESTLFIGAASMGNPHCVMEVDDVDTANVAEIGPL
VEKHERFSEGVNVGFMQIINDSHIKLRVFERGSGETLACGSGACAAVAIGQIQGKLSKDV
RVDLPGGSLRIRWPGPDNVLKMTGPAEHVYDGHINL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttcaattttccaaaatgcacggtttgggtaacgatttcatggtaattgataac
gttactcagaacgtatttttctctaaagaaaaaatccaacaactggctgaccgaaatttc
ggtatcggcttcgaccagctgttgatggttgaaccgccttacgatcctgaacaagacttt
cattatcgtattttcaatgccgatggctctgaagtagagcagtgcggtaatggcgcacgt
tgctttgcgcgctttgttaagcaaaagggcttgataaaccgcaacaaaattgtagtgagt
accaaagcaggcaaaatggtgctttacctagagaaagacgggcaagttaccgtcaatatg
ggtaagccagagttcgaaccggctaacattccccttaaagccaacaagcaagaaaatacc
tatatcttacgcgtgggcgaaagcaccttattcattggcgcagcttcaatgggcaaccct
cattgcgtaatggaagttgacgatgtcgataccgccaacgtcgctgaaattggcccgcta
gttgaaaagcacgaacgcttttcagaaggcgtgaatgtaggctttatgcaaatcatcaac
gactcgcatattaagctaagagtatttgagcgtggttcgggtgaaacccttgcttgtgga
agcggtgcgtgcgcagcagttgcaattggtcaaatacagggtaaattaagtaaagacgtg
cgggtagacttacccgggggcagtttacgtatacgctggcccggcccagataatgtatta
aaaatgacagggcctgccgaacacgtatatgacggacacataaatctatga
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