Alteromonas mediterranea MED64: I533_02805
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Entry
I533_02805 CDS
T02958
Symbol
fadB
Name
(GenBank) multifunctional fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag00071
Fatty acid degradation
amag00280
Valine, leucine and isoleucine degradation
amag00310
Lysine degradation
amag00362
Benzoate degradation
amag00380
Tryptophan metabolism
amag00410
beta-Alanine metabolism
amag00640
Propanoate metabolism
amag00650
Butanoate metabolism
amag00907
Pinene, camphor and geraniol degradation
amag00930
Caprolactam degradation
amag01100
Metabolic pathways
amag01110
Biosynthesis of secondary metabolites
amag01120
Microbial metabolism in diverse environments
amag01200
Carbon metabolism
amag01212
Fatty acid metabolism
Module
amag_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
I533_02805 (fadB)
00650 Butanoate metabolism
I533_02805 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
I533_02805 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
I533_02805 (fadB)
00310 Lysine degradation
I533_02805 (fadB)
00380 Tryptophan metabolism
I533_02805 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
I533_02805 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
I533_02805 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
I533_02805 (fadB)
00930 Caprolactam degradation
I533_02805 (fadB)
Enzymes [BR:
amag01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
I533_02805 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
I533_02805 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
I533_02805 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
I533_02805 (fadB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AGP80554
LinkDB
All DBs
Position
complement(610138..612288)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYTGKSLSVSLLDDGFAELVFDAEGSVNKFDRQTVSELDEATQALLAKGDVKGLVVRSA
KPAFIVGADITEFTGLFAMDDAEVLQWVANTSQVFDRFEDLPFPTIAAINGFALGGGCEM
ALACDMRIADTTASIGLPEVKLGLMPGFGGTVRLPRLIGADNALEWMTTGRDRKGAKALA
EGAVDAVVAPEALVEGALSMVKDAADGKLDWQARRAVKKAPLQLNKNEAMMSFSTAQAMV
FAQAGKHYPAPHKMVETVQKAAGLDRDGALKLENEGFVALAKTDAAKAQIGIFLADQLVK
SKGKKQAKAATKQSKLNAVLGAGIMGGGIAYQSAVKGTPVIMKDINQGALDLGLSEAAKI
LGKGMKRGKVDATKMAQTLNAITPTLEYSTLKDADLVIEAVVENPKVKGIVLKEVEDNVA
DDAIITSNTSTISINQLAESLDKPERFCGMHFFNPVHRMPLVEIIRGEKTSEETINAVVA
ATLKMGKTPIVVNDCPGFLVNRVLFPYFAGFSKLLIDGADFVAVDKVMEKIFGWPMGPAY
LMDVVGIDTGDHAADVMAAGIPERMARLDNDPVTLFYKEERLGQKNGKGFYNYGVDKRGK
PSKTPAEEAYALMAPHVADKTDFEADDIIARLMIPMANEAIRCLEEGIVDSAAEADMALL
YGLGFPPFRGGIFRWIETIGLANFVAMADKYAELGPIYQISDGVREMAAAGKSYFA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatatacacaggcaaaagtctttccgtcagcctgttagatgacggctttgctgagctg
gtattcgacgccgaaggttcagtaaacaagttcgaccgccaaaccgtgagcgaacttgat
gaagcaactcaagccctacttgctaaaggcgatgttaaaggcttagtagtacgcagtgca
aaacctgcatttatcgtaggtgctgatatcactgagttcactggcctattcgccatggac
gatgctgaagtactacagtgggttgccaatacgtcacaagtattcgaccgcttcgaagac
ctacctttccctaccattgctgcaattaacggcttcgcgcttggtggcggctgtgaaatg
gcattggcgtgtgacatgcgtattgctgacaccacggcttcaattggtttgccagaagtt
aagctaggccttatgcctggttttggtggtacggttcgcctacctcgtctaattggtgca
gataatgcgctagagtggatgaccactggccgcgacagaaaaggcgcgaaagcccttgct
gaaggtgcggttgacgcagttgttgctccagaggcgctagttgaaggtgcgctttcaatg
gtgaaagacgcagctgacggtaagcttgactggcaagcacgtcgtgcggttaagaaagct
ccacttcagctaaacaaaaacgaagctatgatgagcttctctactgctcaagccatggta
tttgcacaagctggtaaacattacccagcaccgcacaaaatggttgagacagtacaaaaa
gcagctggcctagaccgtgacggcgcacttaagcttgaaaacgaaggctttgtagcgcta
gcgaaaacagacgctgcgaaagcacaaattggtatcttccttgccgaccagctagttaag
agcaaaggtaagaagcaagcgaaagcggcaaccaagcaatctaagcttaacgctgtacta
ggtgcaggcatcatgggtggcggtattgcataccaaagcgctgtgaaaggcacaccggta
atcatgaaagacattaaccaaggtgcactagaccttggcctttcagaagcggcaaaaatt
cttggcaaaggcatgaagcgcggtaaagttgatgcgactaaaatggcgcaaacacttaac
gctatcacccctacccttgagtacagcacgcttaaagatgcagaccttgttattgaagcg
gttgtagaaaacccgaaagtaaaaggtattgtacttaaagaagtagaagacaatgtagcg
gacgacgctatcatcacttcaaacacttcgactatctctatcaatcagctagctgaaagc
ctagacaagccagagcgcttctgtggtatgcacttcttcaacccagtgcaccgcatgccg
cttgttgaaattattcgtggcgaaaaaacgtcagaagaaaccatcaatgcagtagtagcc
gctacccttaaaatgggcaaaaccccaattgtggttaacgactgcccagggttcttggta
aaccgcgtattgttcccatactttgcgggcttcagtaagcttcttatcgacggcgcagac
ttcgttgcagttgataaagtaatggaaaaaatcttcggctggccaatgggcccagcttac
ctaatggacgttgtaggtatcgacacgggcgatcacgcagcagacgtaatggcagcaggt
attccagagcgtatggctcgcctagacaatgacccggtaacactgttctacaaagaagag
cgtttaggtcagaaaaacggtaaaggtttctacaactacggtgttgataagcgcggtaag
ccatctaaaacacctgctgaagaagcatatgctctaatggcaccacacgtagcagataag
acagactttgaagctgacgacattattgcacgccttatgatccctatggcaaacgaagca
attcgctgcctggaagaaggcattgtagatagcgcagctgaagcagatatggcgctactt
tacggcttaggtttccctccattccgcggtggtattttccgttggattgaaaccattggc
ttggcgaactttgttgctatggcagacaagtacgctgaacttggtcctatttatcagatc
tcagacggcgttcgtgaaatggccgctgctggtaaatcctatttcgcataa
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