Alteromonas mediterranea MED64: I533_02990
Help
Entry
I533_02990 CDS
T02958
Name
(GenBank) ATP-dependent helicase HepA
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
amag
Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
amag03021
]
I533_02990
Transcription machinery [BR:
amag03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
I533_02990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
AGP80591
LinkDB
All DBs
Position
complement(652264..655107)
Genome browser
AA seq
947 aa
AA seq
DB search
MSSDSQFSVGQRWLSNTETELGLGVIMGTDFRSVEVLYPATGEARKYTKQDAPLTRLIFE
IGETVKSQDGWEMTITEKEESQGVCIYHGLREDTKAQVRLPETMLDSHIQLNQPERRLFS
QQLDNPKWFDLRERALDYQYDYLRSSTIGLAGARISLIPHQLHIASEVGGRHAPRVLLAD
EVGLGKTIEAALIIHQQLKTGRAERVLILVPDSLVHQWLVEMLRRVNLPFAIYDESRCDA
IEESEASDAGEVNPFENDQLVLCSIDFLSQSEKRQQQVQAASWDLMVVDEAHHLAWSSEA
PSAEYKCVEALANLTPGVLLLTATPDQLGHESHFARLRLLDPARFHSYNTFLEEESKYSQ
LADAVAPLLSDAEPNDKQRTKLAEFAPDVMEHTGDLSTPENRHALLHQLIDCHGTGRMLF
RNRRANIEGFPERKLSAYELALPEVYADAVSGGELTYSLYPERMASVVNSWTKHDPRVEW
LLDFMQSVKPEKILLICASARTAQELGEVIRTQSGIRHSVFHEGMSIVERDKAAHYFADE
EEGAQILLCSEIGSEGRNFQFAHHLVLFDLPITPDLLEQRIGRLDRIGQTQTVQIHVPYL
AKTAQHVLLDWCHEGLNAFEKTCPTGSGVFDDVKPLLVGACLHPDDMSARDELINMSVTL
NSQLVAQLEAGRDRLLELNASGEGRVEQLLEDIVTLDSEQDLSRFMGRVFDAIGVQQEEK
GNDCFILMPTESMVSQLPGLAPEGMTVTYKRRVATTLENVQFLSWDHPLVHTAIDVILTD
VHGKSSMGFIAEPSLPKGAYWIEALFVLHAQAPKALQLSRFLPQTPVRVCLDAQGNASDL
SFDVKRKIGRKISAQLLKALQQPLELAIEKARKLAHQQANQKQHDALNTMHLTLGEEIQR
LRDLQKRNPAVRDSEIEFIETQMNALDKVIQEADVQLDALRIVVNNP
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgagttcagatagtcaattttcagttggtcaacgttggttaagcaacacggaaacagag
ctaggtttaggtgtgattatgggcaccgatttccgttcagttgaagtattgtaccccgca
actggcgaagcacgtaaatataccaaacaagacgctccactaacgcgactcatctttgaa
attggcgaaacagtaaaaagccaagatggttgggaaatgaccattacagaaaaagaagaa
agccaaggggtgtgtatttatcacgggcttcgtgaagacaccaaagcgcaagtgcgtttg
cccgagacgatgctagacagccatattcaactaaaccaacctgaaagacgtttgttcagc
cagcagctcgacaacccaaagtggttcgatttacgagagcgtgctttagactatcaatac
gactaccttcgctctagcactatcggcctagctggcgcgcgtatttctcttattcctcat
cagcttcacattgcttcagaagtcggcggtagacacgcgccgcgcgtactccttgccgat
gaagtagggttaggtaaaaccattgaagctgcgctaattatccatcagcagcttaaaacg
ggccgcgctgaacgcgtgcttattttggtgcctgactcattagtacaccaatggctggtt
gagatgcttcgtagagtaaacctaccctttgccatttacgatgaaagtcgttgcgacgcg
atagaagaaagcgaagcgtctgatgctggcgaagtgaatccgtttgaaaacgatcagcta
gtactttgtagcatcgactttttaagccaaagcgaaaagcgccagcagcaagttcaggcc
gcaagctgggatttgatggttgtggatgaagctcatcacttggcgtggtcaagcgaggcg
ccatcagctgagtataagtgcgttgaagctttagctaacctaacgcctggtgtattgctg
cttacggcaaccccagatcagcttggtcacgaaagtcactttgctcgcctgcgtcttctt
gaccctgctcgttttcatagttacaacacttttttagaagaagagtcgaaatatagccag
ctggccgacgccgtcgcgccactgctttcagatgcagaacctaacgacaaacaacgtacc
aaattggcagagttcgcccctgatgtcatggagcacactggcgatttgagcacgccagaa
aaccgccatgcgctgttacaccagttaattgactgtcacggcactggccgcatgctgttt
agaaaccgtcgcgctaatattgaaggctttcctgaacgtaaactaagcgcttatgaacta
gcgttacctgaagtctacgcagatgcggtaagcggcggcgagctgacttactcgctttac
cccgagcgaatggccagcgtggtaaatagctggactaaacacgaccctcgtgttgaatgg
ctgcttgacttcatgcagagcgttaagcctgaaaaaatactgcttatttgcgccagtgct
cgtactgcgcaagagctaggtgaagtcattcgcactcaatcaggcattcgacacagcgta
ttccacgaaggtatgagcattgtagagcgcgacaaggctgctcactactttgccgacgag
gaagaaggtgcacaaattctactgtgtagcgaaattggcagtgaaggccgtaacttccag
tttgcccaccatttggtgttgttcgatttacccattacacctgatttactggaacagcgc
attggtcgactcgatcgaattggccaaacgcaaacagtacaaattcacgtaccgtatctt
gctaagaccgcgcagcatgtgttgttagattggtgccatgaaggactaaacgcatttgag
aaaacctgcccgacaggctctggcgtgttcgatgacgttaaaccgttgcttgttggtgca
tgcttacatcccgatgatatgagcgctcgtgatgaacttatcaatatgagcgtaacgctg
aacagccagcttgtagcgcagttggaggccggacgagatcgcttactagagttaaatgcc
tctggtgaagggcgcgtagagcagttactcgaagacattgttacccttgatagcgaacaa
gatctatcgcgcttcatgggccgcgtgttcgacgctatcggtgtacagcaagaagagaaa
ggcaacgactgctttattcttatgcctaccgagtctatggtgagtcagcttcctggcctt
gcccctgagggaatgacagtcacctacaagcgccgtgtggcaacaaccttagagaacgtg
cagtttcttagctgggaccaccctcttgttcataccgccattgacgttatccttacggat
gttcacggcaagagtagcatgggctttattgctgagccgtcgctgccaaaaggcgcatac
tggatagaggcgttatttgttcttcatgctcaagcgccaaaagcgctgcagcttagccgt
ttcttaccgcagacgccggtacgcgtatgcttagatgcccaaggaaatgcgtctgaccta
agcttcgatgtgaaacgtaagattggacgtaaaatttcagcgcagctattgaaagccctg
caacagccacttgagttggctattgagaaggcgcgtaagcttgcccaccagcaggccaat
caaaagcagcacgacgcgttgaataccatgcacttgaccttgggcgaagaaattcaacgt
ttacgcgacttacaaaagcgcaatccagcggtgcgagacagtgaaattgagttcattgaa
acgcaaatgaatgccctcgataaggtaattcaggaagctgatgttcagctagatgcgttg
cgaattgtggtaaacaatccgtaa
DBGET
integrated database retrieval system
