Alteromonas mediterranea MED64: I533_03575
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Entry
I533_03575 CDS
T02958
Symbol
rumA
Name
(GenBank) 23S rRNA m(5)U1939 methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
amag
Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
amag03009
]
I533_03575 (rumA)
Enzymes [BR:
amag01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
I533_03575 (rumA)
Ribosome biogenesis [BR:
amag03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
I533_03575 (rumA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RrnaAD
TRM5-TYW2_MTfase
Methyltransf_11
MTS
Methyltransf_15
Motif
Other DBs
NCBI-ProteinID:
AGP80706
LinkDB
All DBs
Position
795783..797231
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AA seq
482 aa
AA seq
DB search
MANLFKQSRAKQKNKTTPSQAQTNTKGSARANAQVAGLRFKKSKQSKEHNTAQDANNNAI
TIQELDWMGQGVARGATMYFVEGALPGETCDIEVISSKKKVVSAKTISIQGPSELRQPPF
CPVFEACGGCQLQHIDADAALAYRDNALKTMMERQLSIGSGVWQAPLVGPRPQYRRKARL
AIDARNPDNIKLGFREANSNKVVNLDTCPILVNPLSTAIGPLRNALEGYDSARHIGHISL
IAGDNRAQVVIKHTKALEDALIETVDAFAKAHGLDVVLENKQGRLRSVGEAQGLIMHTVD
GCSISPSANDFIQINKVVNEKMINQALVWLDPRPNERIADWFSGLGNFTLPIAKKGALVQ
AIEGVAEMVRRARDNAQQQGIENVEWLHLDLANKANVEASLQQGFDKVLLDPSREGALTV
CHALVKALPKTIVYVSCNPSTFSRDAKVLINGGYEMEKAGVAEMFPFTHHMEMMALFTQR
QQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaacctttttaaacagtctcgcgctaagcaaaaaaataaaacaaccccatcccaa
gctcagacaaacacgaagggaagtgctagggcgaatgcgcaagtcgccgggcttaggttt
aaaaaaagcaagcaatcaaaagaacacaataccgcgcaagacgccaataataatgccata
accatccaggaattagattggatgggacagggcgtggctcgcggcgctacgatgtatttc
gttgaaggtgcactacccggtgaaacttgtgacatagaggtgatatcgagcaaaaagaag
gttgttagtgctaaaacaattagcatccaagggccaagcgaattgcggcaaccccccttc
tgcccggtatttgaagcttgcggtggctgtcagttgcagcatattgatgccgacgctgcg
ttagcgtacagagataacgcgcttaaaactatgatggagcgtcagctttctatcggtagt
ggcgtttggcaagctccactggtaggaccgcgccctcaatatcgcagaaaagcgcggtta
gctattgatgcccgcaacccagataatattaaattgggtttcagagaggccaacagcaac
aaagtagttaaccttgacacctgccctatactcgttaacccactatcaacggctataggc
ccgttgcgtaatgcgctagaggggtatgatagcgcgcgccatattgggcatatcagcctt
attgctggcgacaacagggcgcaagtagttattaaacacactaaggcactagaagatgcg
cttatcgaaacggtagatgcttttgctaaagctcatggtttagatgtggtgcttgaaaat
aagcaaggtcgcctgcgcagtgtaggggaagctcagggcttaattatgcataccgttgac
ggctgctcgatttcccccagtgctaacgactttatccaaattaataaagtggttaacgaa
aaaatgatcaatcaggctttagtatggctagacccgcgccctaatgaacgtatcgctgat
tggtttagcggcttagggaattttaccttgcccattgcgaaaaagggcgccttggtacag
gcaattgaaggggttgcagagatggtgcgccgtgctagagataatgcacagcaacagggc
attgaaaacgttgagtggctgcatttagacttggccaataaggctaacgtcgaagcgtct
ttgcagcagggttttgataaagtattgctcgacccgtcaagagagggagccttgacggtt
tgtcacgcgcttgtaaaagcactaccaaaaacgatagtgtatgtttcttgcaacccaagt
acgttttctagagacgcaaaagtgttgataaacgggggttatgaaatggaaaaagcgggc
gtagcagagatgttccccttcacccatcacatggaaatgatggccttgtttacgcaaagg
cagcagtag
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