Alteromonas mediterranea MED64: I533_03730 Help Entry I533_03730        CDS       T02958                                  Name (GenBank) RNA polymerase sigma-54 factor   KO K03092   RNA polymerase sigma-54 factor Organism amag  Alteromonas mediterranea MED64 Pathway amag02020   Two-component system amag02040   Flagellar assembly Brite KEGG Orthology (KO) [BR:amag00001]  09130 Environmental Information Processing   09132 Signal transduction    02020 Two-component system     I533_03730  09140 Cellular Processes   09142 Cell motility    02040 Flagellar assembly     I533_03730  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03021 Transcription machinery [BR:amag03021]     I533_03730 Transcription machinery [BR:amag03021]  Prokaryotic type   Bacterial type    RNA polymerase     Sigma factors      I533_03730 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Sigma54_DBD Sigma54_CBD Sigma54_AID LTN1_E3_ligase_6th Motif Other DBs NCBI-ProteinID:  AGP80737 LinkDB All DBs Position complement(824527..826008) Genome browser AA seq 493 aa AA seqDB search MKPSLQLKFSQQLTMTPQLQQAIKLLQLSTLDLQQEIQEALDSNPLLEVEEGNDEPQVEK NNIDSDDSVTEASATASSDTLEAGDALEKNDLPDELPIDSTWDEYYSASSAPAPGPSNDD EQIFQGETTEDIQEHLSWQMRLTHFSDTDRAIATAIIDSIDESGYLTVTLEDILDAVNSE DMEEPIEMDEIECVLKRIQMFDPIGSGSRSPQECLMVQLRQFSEDTPWLNEAKQLIEEYS DLLSSKDYRTLMRKSRLKEDQLREAMRLLQTLNPRPGSALVTKEPEYVIPDVSVAKKNGR WVVELNPDSLPKLSVNQQYAAMSRRAKNSSDSQFIRSHMQEAKWFIKSLESRNETLMKVA NCIVQQQMGFFEHGPEMMKPMVLNDVAEMVDMHESTISRVTTQKYMHTPRGIFELKYFFS SHVATESGGECSSTAIRALIKKLVAAEKPSKPLSDSKIASLLAEQGIKVARRTIAKYRES LSIPPSNQRKSLI NT seq 1482 nt NT seq  +upstreamnt  +downstreamnt atgaaaccatctttacagctaaaatttagccaacaacttaccatgacaccccagcttcag caggcgataaaactgctgcagctatctacgcttgatcttcagcaggagattcaagaagcc ctcgattcaaaccctttattggaagttgaagaaggtaacgacgagccgcaagtagaaaaa aataatatcgatagcgacgatagcgtgacagaagcgtctgcgacagcgtctagcgataca ttggaagcgggtgacgcgttagaaaaaaacgaccttcccgatgaattgcctatcgacagc acatgggatgaatactattcagcgtcatcggccccagcgccaggtccttcaaatgacgat gaacaaatatttcaaggcgaaaccaccgaggatattcaggaacatttgtcgtggcagatg cgattgacccatttctcagatactgaccgcgccattgctacggcaattatcgactctatt gacgagtctggctatttaaccgtgacccttgaagacattcttgacgcggtaaactctgag gatatggaagagcctatagaaatggacgaaatagaatgcgtacttaagcgcattcagatg ttcgaccccattggttcgggctcccgctcgccgcaggaatgtctaatggtgcaactgcgc cagttctcagaagacacaccatggcttaacgaagccaaacagcttatagaagaatattca gacctattaagcagcaaagattatcgcacgttaatgcgtaagagccgcttgaaggaagat cagctgcgtgaggcaatgcgtttattacaaaccttgaatcctcgcccaggtagtgcttta gttactaaagagcctgagtacgttattcctgatgtctcggtcgccaaaaagaatggccgt tgggtggttgagctaaaccccgacagcctgcctaagttaagcgttaatcaacaatacgct gcaatgagtcgtcgtgccaaaaatagtagcgactcacaattcatccgctcacacatgcaa gaggctaagtggttcattaagagccttgaatctcgcaacgaaaccttaatgaaggtggca aactgtattgtgcaacagcaaatgggcttttttgaacatggcccggaaatgatgaaacct atggtgcttaacgatgtagcagaaatggtagatatgcacgaatcaacgatttcacgcgtc acaacgcaaaagtatatgcatacaccacgtggtatatttgaattgaaatacttcttctct agccacgtagcaacagagtctggtggtgagtgctcatctaccgcgattcgtgcattgatc aaaaagctagtggcggctgaaaagccgagcaagccactaagcgatagcaagattgcttca ttgttggccgaacaaggcattaaagttgcccggcgaacaatagcaaaataccgggaatca ttgtcgatcccgccgtcgaaccaacgcaagagcctaatttaa

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