Alteromonas mediterranea MED64: I533_04630
Help
Entry
I533_04630 CDS
T02958
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag03030
DNA replication
amag03430
Mismatch repair
amag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I533_04630
03430 Mismatch repair
I533_04630
03440 Homologous recombination
I533_04630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amag03032
]
I533_04630
03400 DNA repair and recombination proteins [BR:
amag03400
]
I533_04630
Enzymes [BR:
amag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I533_04630
DNA replication proteins [BR:
amag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I533_04630
DNA repair and recombination proteins [BR:
amag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I533_04630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AGP80915
LinkDB
All DBs
Position
1022655..1026119
Genome browser
AA seq
1154 aa
AA seq
DB search
MSSPFIHLRVHSDFSMMDGLNKVKPILGKVAALEMPAVAITDQMNMCGLVKFYSEAHNLG
IKPIIGTDFWVTNEAFGDEPFRLTLLAMNNEGYKNITILISKAYLRGHLAHRAVIDQAWL
AEHAEGVIILSGAQHGDVGVGLMKNNAKLLDSALAFYESYFPDRFYLELIRTGRQGEEDY
LHHAVELAEQRGLPVVATNEVCFIDREGFEAHEIRVCIHDGYTLDDNRRPKRYSEQQYLR
TSEEMVELFSDIPEAIENTVEIAKRCNVTVRLNEYFLPQFPTGGMTTEDFLVKVSEEGLE
ERLEFLFPDEEVRKAKRPEYDDRLRIELEVINQMGFPGYFLIVMEFIQWSKDNGIPVGPG
RGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVAEL
YGRQAVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFKAEPQL
PEVYESDEEVKDLIDMARILEGVTRNAGKHAGGVVIAPTTITDFSPLYCDDEGNNPVTQF
DKNDVETAGLVKFDFLGLRTLTIIQWAIDMIKEGKNVDVDISAIPLEDPKSFRTLQNAET
TAVFQLESRGMKELIKRLKPDCFEDIIALVALFRPGPLQSGMVDNFIDRKHGREEISYPD
AEYQHECLQEILEPTYGIILYQEQVMQIAQEMAGYSLGGADLLRRAMGKKKPEEMAKQRG
TFAEGAKGNNIDPDLAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKVHYPAEFMAA
VMSADMDNTDKIVTLVDECERMGIEILPPDLNAGKYKFTVDSEGRIVYGIGAIKGVGEGP
IEAIIEARETQGAFKDLFDFCAKVDIKRVNKRVLEKLVLAGAMDNLGPHRATLMATLPEA
LAAAGQHAKAESFGQSDMFGLLTTEPEEVQQAFADVPEWPEKVWLEGEKDTLGLYLTGHP
INQYADELRYYTDGRLVDLKPTNKDQLASAVGLVLGVRVMTNKRGRRWAIVTLDDKSARM
DVRFFPDMYEQFESLLETDRILLIKGQVSFDDFSGGNTITARDVMDIVQAREKNARALAI
NVDTQRLEPKIMSQMQSILQAFNGGSCPVQLAVTHPDVEVTLACGAKWYVTPEDQLLHDL
KQCLGDKAVSILYH
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcgccatttattcatttacgtgttcacagcgacttttcgatgatggacggcctg
aataaggttaagcctattctaggtaaagttgccgcccttgaaatgccagcggtggcgata
accgatcaaatgaatatgtgcggtttggttaagttctattccgaagcacataatctggga
ataaagcccatcattggtaccgacttttgggttaccaatgaagcgtttggtgatgagccg
tttaggcttacgctattggcgatgaacaatgaaggttataagaatatcaccattcttatt
tctaaagcgtaccttcgcggacatttagcgcaccgagctgttatcgaccaagcatggcta
gccgaacacgcagagggagtaatcatactctctggcgcacaacacggcgacgtgggcgtg
gggttaatgaagaataacgctaagcttttagacagtgccttagcattttatgagtcttac
ttccccgatcgattttacctcgagttaataagaaccggcagacagggtgaagaggactac
ttgcaccatgcggtagagctcgctgaacagcgcggtttgcccgtggtcgccaccaacgag
gtgtgcttcattgaccgtgaggggttcgaggcgcatgaaatacgcgtatgtattcatgat
ggttacacgttggacgataaccgtcggcccaagcgttatagcgaacagcagtacctgcgc
acgagtgaagaaatggttgagctatttagcgatattccagaagccattgaaaatacggtt
gaaatagcaaagcgctgtaacgttacggtacgtcttaacgaatacttccttccccagttc
ccaacaggtggaatgaccactgaagacttcttggttaaagtgtctgaagaagggttggaa
gagcgtctagaatttcttttccccgatgaggaagttcgcaaagctaaacgcccagagtac
gatgaccgacttcgcattgagcttgaagtaattaaccaaatggggttcccaggctacttc
ctaatcgtaatggagttcattcagtggagtaaggataacggtattccggtagggccagga
cggggctccggtgcaggttcattggtggcgtatgcgcttaaaattaccgacttagatccg
ctagaattcgacttgctatttgaacgtttcttgaacccagagcgtgtatctatgcccgac
ttcgacgtcgacttctgtatggatagacgagatgaagtaattgaccacgttgccgagctc
tacgggcgccaggcggtatctcagatcattacctttggtactatggcggcaaaagcggta
gtacgtgatgtgggccgagtattgggtcacccttatggttttgtagacagaatttcaaag
cttataccgcccgaccctggtatgacgctagaaaaagcgtttaaagctgagccacagctg
ccagaagtttatgaaagcgatgaggaagtgaaagaccttatcgatatggcgcgcattctt
gaaggggttacccgaaatgccggtaagcacgccggtggtgttgttatcgcgccaaccacg
attactgatttctcgccgctgtattgtgatgacgaagggaataacccggtaacccagttc
gataagaacgacgttgaaacggcaggcttggtaaaattcgacttcttaggtcttcgtaca
ctgacgatcattcagtgggcgatagatatgatcaaagagggcaagaacgttgatgtagat
atcagcgctattccgcttgaagatcctaagagtttcaggacccttcaaaacgccgaaacc
actgcagtattccagttggaatcccgcggtatgaaagagctaattaaacgccttaagccg
gactgctttgaagatatcatcgcattggtggctctattccgcccgggaccactgcagtca
ggcatggtagataactttatcgaccgtaagcacggacgtgaagaaatttcttacccagac
gctgaatatcagcacgaatgccttcaagaaatactagaacctacctacggcattatcttg
tatcaggaacaggtaatgcagattgctcaggaaatggcaggttactcactcggcggcgct
gacttacttcgccgtgcaatgggtaagaaaaaacctgaagaaatggcgaagcagcgcggt
accttcgctgaaggtgctaagggcaataatattgaccctgatctggccatgaaaatcttc
gacttggtagaaaaattcgccggttacgggtttaacaaatctcactcggcagcatacgcg
ttggtgtcttaccaaacgctgtggctaaaagtgcattatccggctgaatttatggctgcg
gtaatgtcggcggatatggataacaccgataaaatcgtaacccttgtcgatgaatgtgaa
cgcatgggtattgagatactgccgccagatttaaacgcaggcaaatacaaatttaccgtt
gatagcgaaggtcgcattgtttatggcattggcgcgatcaaaggggtaggtgaaggtccg
attgaagcgattattgaagcgcgcgagacccaaggtgcgtttaaagatctcttcgacttc
tgcgcgaaggttgatatcaagcgtgttaacaaacgtgtactcgaaaaattagtgcttgct
ggtgcgatggataatttaggcccccaccgggctacgcttatggcgacgcttcccgaagcg
cttgcagcggcggggcagcatgccaaggccgagtcgtttggtcagtcagacatgtttggc
ctattaaccaccgagcctgaagaagtacagcaggcctttgccgacgtacctgagtggcct
gagaaagtgtggcttgagggcgagaaggatacgctgggcttgtatttaacaggccatcct
atcaatcagtatgctgacgagcttcgctactataccgacggtcgcctggtcgacttaaaa
cctaccaataaagaccagcttgctagtgcagttggcttggtattgggcgttcgtgttatg
acaaacaaacgagggcgccgctgggcaatagtgacactggatgataagagtgccagaatg
gacgtgcgtttctttccagacatgtacgaacagttcgaaagtttgctagaaactgacaga
atattgctcataaagggacaggtcagctttgatgatttctctgggggcaatacaatcacc
gcccgtgatgtaatggacattgttcaggcacgagagaaaaacgcgagagcgctggcgata
aatgttgatacccagcggcttgaaccgaaaataatgagtcagatgcaatctatcctgcag
gcatttaacggtggaagttgtcctgttcagttagcggtaacccatccagacgtagaagta
accttagcgtgtggagcaaagtggtacgttacccctgaagatcaacttttacacgatctc
aagcaatgtttgggagacaaagccgtttcaattctctaccattaa
DBGET
integrated database retrieval system
