KEGG   Alteromonas mediterranea MED64: I533_05465
Entry
I533_05465        CDS       T02958                                 
Name
(GenBank) DNA polymerase III epsilon subunit-like 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
amag  Alteromonas mediterranea MED64
Pathway
amag03030  DNA replication
amag03430  Mismatch repair
amag03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:amag00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    I533_05465
   03430 Mismatch repair
    I533_05465
   03440 Homologous recombination
    I533_05465
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:amag03032]
    I533_05465
   03400 DNA repair and recombination proteins [BR:amag03400]
    I533_05465
Enzymes [BR:amag01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     I533_05465
DNA replication proteins [BR:amag03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     I533_05465
DNA repair and recombination proteins [BR:amag03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     I533_05465
SSDB
Motif
Pfam: RNase_T Adeno_E4_34
Other DBs
NCBI-ProteinID: AGP81077
LinkDB
Position
1205783..1206688
AA seq 301 aa
MTRAPAPFPLERLADIPERPEDFRLLERIPLTREPQSWPLELSPMVGDEQPMVLLDTETT
GLSAEDESIIELGMVKVLYSPSAQRIVSIVDVISLYEDPGKPIPELITELTGITDDMVQG
QHIDDSLVASWLSDDPLVVAHNAQFDRPFFEKRFAALGHLSWACSASGIDWKALGFESRK
LEYLLLRLGWFYEGHRAATDCLAMAWLFHLLPESVANLLSEADRRTVLVRAFGAPFDVKD
YLKERGYRWHDGVKGANKHWWREISEDELPQEQTYLDDLYHRGSEHAHYDYKDARNRFKA
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atgacaagagcccctgcgccatttccgctagagcgcctcgcggatattccagaaagacca
gaagattttagattgctggagcgtattccattaacgcgtgagccgcagtcctggccactt
gaactttctcctatggttggtgatgaacagccaatggtgctgctcgatacagagacaacc
ggactgtctgccgaggacgagtccattattgagcttggtatggttaaggtgctttacagc
ccctctgctcagcggattgtgtcgattgttgatgtgatcagcttgtatgaagatcccggt
aagcctatccccgagctgattaccgagttaaccggtatcaccgatgatatggtgcaaggc
cagcacattgatgattcactggtagcgagttggttatccgatgatccgctggtggttgca
cacaatgcgcagtttgatcgtcctttctttgaaaagcggtttgctgcattaggccatcta
tcttgggcctgttcagccagtggcatagattggaaggcactgggttttgaaagtcgaaag
cttgagtacctgctgcttcgcttaggttggttttatgaaggacaccgagctgcaaccgat
tgtttggcgatggcctggttgttccatttgttgcccgagtccgttgcaaacttgttgtct
gaagcggacaggcgaactgtgttagttcgtgcgtttggtgcgccgtttgacgtaaaggac
tatttaaaagagcgtggttaccgctggcatgacggtgttaaaggtgccaacaagcattgg
tggcgcgaaatcagcgaagacgagttaccgcaggaacaaacttacctggatgatttgtac
catcgtggctcagaacatgcccactatgactacaaagatgctcgcaatcgatttaaagct
ttgtag

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