KEGG   Alteromonas mediterranea MED64: I533_05530
Entry
I533_05530        CDS       T02958                                 
Name
(GenBank) conjugal transfer pilus assembly protein TraD
  KO
K12071  conjugal transfer pilus assembly protein TraD
Organism
amag  Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:amag00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amag02044]
    I533_05530
Secretion system [BR:amag02044]
 Type IV secretion system
  Conjugal transfer pilus assembly protein
   I533_05530
SSDB
Motif
Pfam: TrwB_AAD_bind TraG-D_C FtsK_SpoIIIE AAA_10 DUF87 T4SS-DNA_transf AAA_22 AAA_29 HerA_C ResIII Zeta_toxin DEAD
Other DBs
NCBI-ProteinID: AGP81090
LinkDB
Position
1222450..1224270
AA seq 606 aa
MKENAYEMPWRTNYEAMAAAGWLVGATGAIAAEMLTELPPEPFWWMTGISSGMALYRLPE
AYRLYKLQMGLKGKPLAFMELSHLQKVMAKHPDELWLGYGFEWDQRHAQRAYEILKRDKQ
TLLNQGHGKQMGSTWIHGVEPKEEDVYQPVGHTEGHTLIVGTTGAGKTRCFDAMITQAIL
RNEAVIIIDPKGDKELKDNAQRACIAAGSPERFVYFHPGFPERSVRLNPLRNFNRGTEIA
SRIAALIPSETGADPFKAFGQMALNNIVQGLLLTSQRPDLKTLRRFLEGGPEGLVVKAVT
AWGEQVYPNFSVEIKRFTEKANTLAKQAMAMLLFYYERIQPVAANTDLEGLLSMFEHDRT
HYSKMVASLMPVLNMLTSSELGPLLSPIANDVDDSRLITDSGRIINNAQVAYIGLDSLTD
AMVGSAIGSLLLSDLTAVAGDRYNYGVENRPVNIFIDEAAEVVNDPFIQLLNKGRGAKMR
CVIATQTFADFAARTGSEAKARQVLGNINNLIALRVMDAETQQYITDNLPKTRLQYIMQT
QGMSSNSDSPALFTGNHGERLMEEEGDMFPPQLLGQLPNLEYIAKLSGGRVIKGRIPILT
SSTQAA
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgaaagaaaacgcatacgagatgccctggcgcacgaactatgaagccatggccgcagca
ggttggctggttggggcaacaggggcaatagccgcagaaatgctgactgagttaccacct
gaaccattttggtggatgacagggatttcctcgggcatggcgttgtatcgccttcctgag
gcttatcgcctttataagttgcagatggggctaaaaggcaaaccattggcatttatggag
ctgtcgcatttgcaaaaggtgatggcaaaacatcctgatgaattgtggttagggtatggc
tttgagtgggatcaacgtcatgcccaacgcgcttatgaaatcctaaagcgggataagcaa
accttgcttaaccaaggtcacggcaaacaaatgggttcgacctggattcatggtgtcgag
cccaaagaagaagatgtgtatcagccagttggtcacaccgaggggcataccttaattgtc
ggaacgaccggtgccggaaaaacccgatgctttgatgcgatgatcactcaggccattttg
cgtaatgaagctgtgattattattgaccctaagggagacaaggaacttaaggataatgca
cagcgagcctgtattgccgccggtagtccagagcgctttgtgtattttcatccgggtttt
ccagagcgatcagtacgtcttaatcctctgagaaactttaaccgaggcactgaaattgcc
agccgaatagcggccttaatcccatccgaaaccggagctgatccatttaaagcttttggc
caaatggcattgaacaacatcgtgcaaggtttgttgcttacttctcagcgtcctgatctg
aagactctgagacgattcttggaaggcggcccagaaggcttggtagtaaaagccgtcacg
gcttggggtgagcaggtatatccgaactttagtgtggagattaagcgctttaccgaaaag
gccaataccttggcaaaacaagcgatggcgatgctgcttttttattacgaacgcattcag
cccgttgccgccaataccgatttggaagggttattgagtatgtttgagcatgacagaacc
cactattccaagatggtggcttcattgatgccggtgctcaatatgctcacttcaagtgaa
cttggcccgctgctatcaccgattgcaaacgatgtagatgacagcaggttaattacggat
tctggccgtattatcaacaatgcccaagtggcctatatcgggttggattcattgaccgac
gccatggttggcagcgccattggttcgttgcttttatccgatctcaccgccgtggccggt
gaccgctataactatggtgttgaaaatcgtcccgtaaatatcttcatcgatgaggcggct
gaagtcgtcaacgatcccttcattcaactgctcaacaaaggccgtggcgcaaaaatgcgt
tgtgtgattgctactcagacctttgctgactttgcagctcgtacaggcagtgaagctaag
gcccgtcaggtgttaggtaacatcaacaacctgatagctcttcgggtgatggacgccgaa
acacagcagtacattactgacaatctgcctaagactcggttgcagtacatcatgcaaact
caaggtatgtcgtccaactcggacagtccagcgttgtttaccggcaatcatggcgagcgc
ttgatggaagaagaaggcgatatgtttccaccgcagttattaggccagcttcccaacctg
gagtacatcgccaagctttcaggtggccgcgtgatcaaaggccgcattcctattttaacc
agctctacacaggcagcataa

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