KEGG   Alteromonas mediterranea MED64: I533_06355
Entry
I533_06355        CDS       T02958                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
amag  Alteromonas mediterranea MED64
Pathway
amag02024  Quorum sensing
amag03060  Protein export
amag03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:amag00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    I533_06355
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    I533_06355
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    I533_06355
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:amag02044]
    I533_06355
Enzymes [BR:amag01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     I533_06355
Secretion system [BR:amag02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   I533_06355
  Eukaryotic Sec-SRP protein
   I533_06355
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA cobW AAA_22 AAA_30 Peptidase_C23 KTI12 AAA_33 AAA_16 SLFN-g3_helicase APS_kinase AAA_31 YqeC T2SSE VirC1 AAA_14 nSTAND3 AAA_19 Helicase_RecD ATP_bind_1 TsaE AAA_28 DO-GTPase1 Thymidylate_kin FliD_C AAA_24 AAA
Other DBs
NCBI-ProteinID: AGP81251
LinkDB
Position
1407969..1409381
AA seq 470 aa
MFENLSERLGQTLRNVSGKGRLTEDNIKETLREVRMALLEADVALPVVKAFVAQVKERAV
GTEVTKSLKPGQVFIKIVQSELESVMGEANEKLNLATQPPAVVLMAGLQGAGKTTSVGKL
AKYLTEREKKKVMVVSADVYRPAAIKQLETLADEVKVAFHPSTILQKPIDIVNDAIAEAK
KNFFDVLLVDTAGRLHVDNDMMNEITELHAAVKPIETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKADGDARGGAALSVRHITGKPIKFIGMGEKVDALEPFHPERIASRILGMGDV
LSLIEEVERKVDKSKAEKLAKKVQKGKGFDLQDFKDQLEQMKNMGGMMGMLDKLPGMGGM
SDKIKDQANDKQFNQMEAIINSMTPAERARPDIIKGSRKRRIAAGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMKKMMRQMKGMVPPGGGFGGPGGPGGFGGGGGFPPR
NT seq 1413 nt   +upstreamnt  +downstreamnt
atgtttgagaatttatcagaacgcttaggccaaacattacgaaatgtaagtggtaaaggg
cgtcttactgaagacaatattaaagagacgctacgcgaagtgcgcatggcgctgcttgaa
gccgacgtagcgctgccagtggtcaaagcgtttgttgctcaggtaaaagagcgtgcggtt
ggtacagaagttactaaaagcttaaagccaggccaagtattcataaaaatcgttcagtct
gaactcgagtcggtaatgggggaggcgaatgaaaagcttaacctagccactcagcctcct
gctgtagtgcttatggctggtttacaaggtgcgggtaaaaccacctctgtaggtaaactt
gctaagtacctgactgaacgtgagaaaaagaaagtgatggtagtcagtgctgacgtttat
cgtccagccgctatcaagcagcttgaaaccctagctgatgaagtgaaggttgcgtttcac
ccatctactatcttacaaaagcccattgatatcgttaacgatgccatcgctgaagcgaag
aaaaacttctttgatgttctgcttgtagatacagcaggccgtttgcacgtcgataacgac
atgatgaacgaaattacagagttacacgctgcggttaagcccattgagaccctattcgta
gttgatgccatgacaggtcaagatgccgctaatacagcaaaagcgtttaacgacgcgcta
ccactgaccggtgttattcttactaaggccgacggtgacgcccgcggcggtgcggcatta
tctgtacgtcacataacaggtaagcccattaagttcatcggtatgggcgaaaaagtggat
gcgcttgagccattccaccctgagcgtattgcttctcgtatcttggggatgggcgacgta
ctaagccttatcgaagaagttgagcgcaaggtcgacaaatcaaaagccgaaaagctggcg
aaaaaagttcaaaaaggcaagggctttgatcttcaagactttaaagatcagcttgagcaa
atgaagaacatgggcggcatgatgggcatgctagataagctgcctggcatgggtggtatg
tctgataagattaaagatcaggcaaacgacaagcagttcaatcaaatggaagccatcatt
aattcaatgacaccagctgagcgcgctcgccctgatattatcaaaggctcgcgcaagcgt
cgtatcgcagcgggttcaggtacgcaaattcaagatgtaaaccgcttgcttaagcagttt
acgcaaatgcaaaaaatgatgaaaaagatgtctggcggcggcatgaagaaaatgatgcgc
cagatgaaaggcatggtgccacccggtggcggtttcggtgggccaggcggccctggtggt
tttggcggaggcggtggtttccctcctcgctaa

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