Alteromonas mediterranea MED64: I533_08180
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Entry
I533_08180 CDS
T02958
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag03030
DNA replication
amag03430
Mismatch repair
amag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
I533_08180
03430 Mismatch repair
I533_08180
03440 Homologous recombination
I533_08180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amag03032
]
I533_08180
03400 DNA repair and recombination proteins [BR:
amag03400
]
I533_08180
Enzymes [BR:
amag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
I533_08180
DNA replication proteins [BR:
amag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
I533_08180
DNA repair and recombination proteins [BR:
amag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
I533_08180
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AGP81612
LinkDB
All DBs
Position
1832996..1833715
Genome browser
AA seq
239 aa
AA seq
DB search
MRQIVLDTETTGIDPKEGHRIIEIGCVEVVNRRLTGNHFHVYINPGRHIEQEAIEVHGIT
NEFLTDKPTFAQVAQEFVNFIKGAQLVIHNAPFDVGFMDHEFGMEPSTKGVITNQICDVL
DTLTLARQMHPGQKNNLDALCKRYGIDNSHRTLHGALLDAEILADVYLLMTGGQTKLKLA
SSGGSETDSTAIRRVQRKTNKLKVIKASADELTQHEARLDIVEKAGGKCLWRPNVDEVS
NT seq
720 nt
NT seq
+upstream
nt +downstream
nt
atgcgccaaattgtactcgatactgaaaccactggtattgatcccaaagaaggccaccgt
attatcgaaattggctgtgttgaagtcgtgaaccgccggttaacggggaatcacttccat
gtgtatatcaacccaggccggcatatagaacaagaggctatcgaagttcacggcattacg
aatgagtttcttaccgataaaccaacgtttgcgcaggttgcacaagagttcgtgaacttt
ataaaaggggcgcagttagttattcacaacgccccgtttgacgtcgggtttatggaccat
gaatttggcatggagccgtcgactaaaggggttatcaccaatcaaatttgtgatgtgctc
gatacgcttaccctcgctcgacaaatgcacccgggccagaaaaataatcttgatgcacta
tgtaaacgctacggcatagacaacagccaccgtacgctccacggcgcgttactggatgca
gagatattagccgacgtttatctcttgatgaccggcggtcagactaagctaaaacttgca
tcatcaggtggtagtgaaactgactccaccgcaatcagaagagtgcagcgcaaaacaaat
aaattaaaggttatcaaagcgtccgccgatgagttaacacaacacgaagctcgtctagac
atcgttgaaaaggcgggtggtaaatgtttgtggcgccctaatgttgacgaggtgtcttaa
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