KEGG   Alteromonas mediterranea MED64: I533_08895
Entry
I533_08895        CDS       T02958                                 
Name
(GenBank) ribosomal large subunit pseudouridine synthase E
  KO
K06181  23S rRNA pseudouridine2457 synthase [EC:5.4.99.20]
Organism
amag  Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:amag00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:amag03009]
    I533_08895
Enzymes [BR:amag01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.20  23S rRNA pseudouridine2457 synthase
     I533_08895
Ribosome biogenesis [BR:amag03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    I533_08895
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AGP81752
LinkDB
Position
complement(1995795..1996337)
AA seq 180 aa
MSSNSQVVLFNKPFQVLSQFTDADGRETLKDYIDIPDVYAAGRLDRDSEGLLVLTNDGKL
QHKLANPKAKTSKTYWVQVEGIMHEKAMQALRDGVELKDGMTLPAKVRAMDEPQVWPRNP
PVRFRQSIPTSWVSITITEGRNRQVRRMTAHVGYPTLRLIRYRVGSWTIDGIENGKYVCF
NT seq 543 nt   +upstreamnt  +downstreamnt
atgtcttcaaactctcaagtggtgctgttcaataagccctttcaagttctatcccagttt
acagacgctgatggcagagaaaccctgaaagactatatagatattcccgatgtctacgcc
gcaggacggttagaccgtgattcagaaggtctattagtgcttaccaatgacggtaaactt
caacacaagcttgccaacccaaaagctaaaaccagcaaaacgtactgggttcaagtagag
ggtatcatgcatgagaaagccatgcaggcgctaagggatggcgtagaacttaaagacggt
atgaccctcccagccaaagtgagagcaatggacgagcctcaagtttggccaagaaaccca
cccgtgcgatttaggcagtcgatccctactagttgggtatcgattactattaccgaaggg
cgtaaccgccaagttcgacgaatgactgcacatgtgggctaccctacactacgcttaata
agatatcgcgtgggcagttggaccattgacggtatagaaaacggtaagtacgtctgtttt
tag

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