Alteromonas mediterranea MED64: I533_09010
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Entry
I533_09010 CDS
T02958
Name
(GenBank) cell elongation-specific transpeptidase
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
amag
Alteromonas mediterranea MED64
Pathway
amag00550
Peptidoglycan biosynthesis
amag01100
Metabolic pathways
amag01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
I533_09010
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
I533_09010
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
amag01011
]
I533_09010
Enzymes [BR:
amag01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
I533_09010
Peptidoglycan biosynthesis and degradation proteins [BR:
amag01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
I533_09010
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
AGP81775
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All DBs
Position
complement(2018936..2020849)
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AA seq
637 aa
AA seq
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MHRKRQAIRDHSAEANLFARRATIAFIIVIAMLGIVLNNLYSLQVTQFEDYQTRSNGNRI
KVLPIAPNRGLIYDRNGVLLAENRPVFSLEVIPEQVDDIDATLLELTELMGITNDELERF
QSTLKGTRRFKPVALRTQLSEEEVALFSASKHKFPGVQIEARLARHYPYKETLTHALGYV
ARINKRDLQKLVEAGQEDNYAATHDIGKLGIEKYHEELLHGKVGYQQVEVNNQGRIIRVL
SVEPPTPGKDIVLNLDLELQLEAQRIIDGMRGAIVVTDVKTGGVLALYSNPSYDPNLFVH
GISSKNYSALLNSPDRPLINRATQGQYPPASTIKPHLGLVGLEEGVITKDYTITDTGRYK
LPNVSHVWRDWRRWGHGKVDVSKAIEVSCDTYYYELAYKLGIDKISDAMYKFGFGDFTGI
DLYEESDANMPSRGWKRARFNQPWYIGDTIPVGIGQSYWTTTPVQLNTSVNTLINAGERY
IPQIIRGYMNTDSSVDLIPLKSLRPIEIKNRDNLDVVLNAMRDVVSGEEGGARHAFADTP
YDSAGKTGTAQLFTVGQNEKYDASKIDERLRDNAMYVGFAPFDDPEISVTVVLENVGGGS
KNAAPVARQIMDFYFRDRVFDTVNTAQSNNTNKLGAN
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgcaccgaaaacgtcaagcgatacgcgaccattcagccgaagcgaacttgttcgctcgt
cgggcgacgattgcttttatcattgttatagccatgttgggcattgtgctaaacaacctt
tattctttgcaggttactcagtttgaagattatcagacccgttctaacggtaaccgaatt
aaagtgctgccgatagcgcccaaccgcgggcttatctacgatcgtaacggtgtgctttta
gcagaaaatcgccccgtttttagtttggaagtcattcctgaacaggtcgatgatattgat
gcaacccttctcgaactgactgaactgatgggtattactaatgatgaacttgaacgcttt
cagtcaacgcttaaaggtacccgccgatttaaaccggtagcacttcgtacacagcttagc
gaagaggaagttgcgctattttccgccagcaaacataagtttcccggcgtacaaattgag
gctcgtctggcccgtcattacccctacaaagaaacccttacgcatgcccttggttacgtt
gcccgaattaataaacgagacttacaaaagcttgttgaggcgggccaagaagataactat
gcggctacgcatgacattggtaagttgggtattgaaaaatatcatgaagaactcctgcac
ggaaaggttggttaccaacaggtggaggtcaacaatcaaggccgaattattcgcgttctt
agtgttgaaccgccaacgccaggcaaagacatcgtacttaatttagatctagaacttcag
ctagaagcccaacgcattatcgatggcatgcgtggagcaattgttgttaccgacgtgaaa
accggtggagtgctggcactttattcaaaccccagttacgaccccaacttgtttgttcac
ggcattagcagtaagaactattcagcactgttaaattctcccgaccgcccgcttattaat
cgagcgacccaggggcaatacccgccagcgtcgacgattaagcctcacctaggcttagta
ggcttagaagaaggtgtgatcacgaaagactacaccattactgatacgggccgttataaa
ctgccaaacgtatcacacgtttggcgtgattggcgtcgctggggtcatggcaaagttgat
gtttctaaagcgatagaggtgtcctgcgatacctattattacgagttagcctataaactg
ggtatcgataaaataagcgacgccatgtataaatttggcttcggtgattttaccgggatc
gacttatatgaagaatctgatgccaatatgcctagccgtggctggaagcgcgctaggttt
aatcagccttggtacataggcgataccatcccggtaggcattggtcaaagctattggacc
accactcctgtgcagctcaatacctcagtgaatacgctgataaacgcgggggaacgctac
attccgcaaattattcgcggctatatgaatacggatagctcggtagacctcattcccctt
aaatcgttacgccctatcgaaattaaaaatcgcgacaacttagatgttgtattgaacgcg
atgcgcgatgttgttagcggtgaagaaggcggcgctaggcatgcctttgccgatactcct
tacgactcagcgggtaaaacaggaacggctcagctgtttactgtaggacaaaatgaaaag
tatgatgccagcaaaatagatgagcgccttcgcgataacgccatgtatgttggctttgca
cctttcgatgacccggaaatttcggtaacagtagtgctagagaatgtgggaggcggaagt
aaaaatgctgcgcccgtagctcgtcaaattatggacttttacttcagagatcgggtgttc
gacaccgtcaatacagcacaatcaaacaataccaataagttaggggcgaattag
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