Alteromonas mediterranea MED64: I533_09135
Help
Entry
I533_09135 CDS
T02958
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
amag
Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
amag03032
]
I533_09135
03400 DNA repair and recombination proteins [BR:
amag03400
]
I533_09135
Enzymes [BR:
amag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
I533_09135
DNA replication proteins [BR:
amag03032
]
Prokaryotic type
DNA Topoisomerases
I533_09135
DNA repair and recombination proteins [BR:
amag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
I533_09135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AGP81800
LinkDB
All DBs
Position
2044181..2045203
Genome browser
AA seq
340 aa
AA seq
DB search
MHEDDSHLSIKRIACGNKRFYYRYTSGKKVTGQRVISRIKKLVIPPNWRDTFISRDSKAS
VQAIGYDEKGRKQYIYHEKWHEQQQVQKFERLIAFGNALPAFREHCISLISQSSWTLERA
CALVCLLLDYTGARVGNTQYSKENSTYGLTTLRRKHVQAQCDDSVELAYIGKHGKPRTLK
VNDPELASLICDCAQQQGYCLFRYQDHRKQWHDVTSEDVNAFIHEELSEQFSCKDFRTWA
SSRFALTVMPDVYERVASSKTKKWESTLSKTVSAELGNTPAVCRKYYIHPKLFAIKNQGE
AFENTLNRVRSLAGEDCTQIAHLLPVEKLLLDVISTKSNE
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgcatgaagatgatagccacctatcaattaagcgcatagcgtgcggaaataaacgtttt
tactatcggtacaccagtggtaagaaggttaccggtcaacgtgtgataagccgcataaag
aaactagttatcccaccgaattggcgagatacctttatcagccgcgacagtaaggcgagt
gttcaggcgattggatacgatgaaaaaggccgtaagcaatacatttatcatgagaagtgg
catgagcaacagcaggtacaaaagtttgagcggttgattgcttttggcaatgcccttcca
gcgtttcgagagcattgcatttctctcatttctcaatcttcctggacgctagagcgcgca
tgcgcgcttgtttgtcttttattagactacaccggcgctagggtagggaatacgcaatac
agtaaagagaacagcacctatgggcttacgacgctgcgacgcaaacacgttcaggcgcag
tgcgacgacagtgtagaacttgcgtacataggaaaacatgggaaaccgcgaaccctgaaa
gtgaatgacccagaattggcgtctttaatatgtgattgcgcacaacaacaaggttattgc
ttatttcgctatcaagatcaccgtaaacaatggcacgatgtaacgagcgaagatgtgaac
gcgtttatacatgaggagctgagcgaacaatttagttgtaaggactttaggacttgggcg
tcgagccgttttgccctaacggtgatgcccgacgtatatgaacgtgtagcaagttcaaaa
actaaaaagtgggaaagcacattaagtaaaaccgtatcagctgaactaggcaatacgcca
gcggtttgcagaaaatattatattcacccgaaactatttgctattaaaaaccagggggaa
gctttcgaaaacacgctaaatcgtgtgcgatcgctggctggcgaagattgtacacagatt
gcgcacttactgcctgtagaaaagcttcttttggatgttatttctactaagagcaatgag
tga
DBGET
integrated database retrieval system
