Alteromonas mediterranea MED64: I533_10030
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Entry
I533_10030 CDS
T02958
Name
(GenBank) deoxyribodipyrimidine photolyase-like protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
amag
Alteromonas mediterranea MED64
Brite
KEGG Orthology (KO) [BR:
amag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
amag03400
]
I533_10030
Enzymes [BR:
amag01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
I533_10030
DNA repair and recombination proteins [BR:
amag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
I533_10030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AGP81976
LinkDB
All DBs
Position
2259229..2260767
Genome browser
AA seq
512 aa
AA seq
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MAALILVLGDQLTDSLPVIAGAVKSKDTILMAEVREEATYVKHHKKKIAFLFSAMRHFAE
HLRDNNYQVNYVHYIDEGNQGDLLAQVKHTLSRQHFDEVKVTVPGEYRLLKSMQQWQNQL
GIPVTICEDNRFFSTPNEFSEWADGKKQLRMEFFYREMRRKHNVLMDGKNPIGGKWNYDA
QNRESMPETQKVPKHTTFAIDDITSDVIELVKSEFSEHFGDIDNFHFAVTRKDALSVLNT
FIEERLPNFGQYQDAMVEGKPWLYHSHIAFYLNCGLLTPKEAIQAAEQAYHAGQVPLNSA
EGFIRQILGWREYVRGFYWHFMPNLKTDNYFDNSRALPSFFWDAQTNMNCMRQCIKETQQ
NAYAHHIQRLMVIGNFSLLTELSPEEVQAWYLLVYADAYEWVELPNVAGMILYSDGGNLA
SKPYVASGSYINKMSNYCKNCGYQVSKKTGPKACPFNYLYWHFIDKHKEKLSNNHRMAMI
YKTYGRMKEENIETMKQDATIFLSKLTKNEEV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacttattttagtcctaggtgaccagctcaccgactcattaccagtaatagcg
ggcgccgtaaaaagcaaagacaccattcttatggcagaagtgcgggaagaagctacctat
gtaaagcatcataaaaagaagatcgctttcctgtttagtgccatgcgtcattttgctgaa
catttgcgcgacaataactatcaggttaactacgtccactatatcgatgaaggcaaccag
ggtgatttacttgcacaagtaaagcatacgttaagtcggcagcactttgatgaagttaag
gtaactgtgcctggggaatatcggctgcttaaaagcatgcagcagtggcaaaatcaacta
ggtatacccgttactatttgcgaagataatcgctttttctctacccccaatgaatttagt
gaatgggccgatggaaaaaagcagcttcgcatggagttcttttatcgggaaatgaggcgc
aagcacaatgtgttgatggatggtaaaaaccctattggggggaaatggaactatgacgcg
caaaatcgcgagtctatgcctgaaacccaaaaggtgccaaaacacaccacattcgctatt
gacgatattacttcagatgttatcgaattagtaaaaagtgaattcagcgaacattttggc
gatattgataattttcactttgcggtcacgcgaaaagatgcactcagcgttttgaacacc
ttcatcgaagagaggctaccaaatttcggtcagtatcaagacgctatggtcgagggaaag
ccttggctttatcattcacatatcgcgttctacttaaactgtggccttcttacaccgaaa
gaagccattcaagccgccgaacaagcctaccacgcagggcaagtgccgctaaattctgcg
gaagggtttatccgacaaattctgggatggcgcgagtatgttcgcggtttctattggcac
ttcatgcctaacttgaagaccgataattacttcgataatagtagagcgttaccttctttt
ttctgggatgcgcagaccaacatgaactgtatgcgtcagtgcattaaagagactcagcaa
aacgcctatgctcatcatattcaacggctaatggtaataggcaatttcagcttgttaacc
gaactgagccctgaagaggtacaagcttggtatttgctggtttatgccgatgcttatgaa
tgggttgaactgcccaatgtcgcgggaatgattttgtacagcgacggtggaaacttagca
agtaaaccctacgtcgcaagcgggagctatatcaacaaaatgagtaactactgcaaaaac
tgtggctatcaggtttcgaagaaaacgggaccaaaagcttgccccttcaactatctttat
tggcattttattgataagcataaagaaaagttaagtaacaatcaccgtatggcaatgatt
tataagacctatgggcggatgaaagaagaaaatatagaaaccatgaaacaggacgccacg
atatttctatcaaagctaactaaaaatgaagaagtctga
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